The Swiss Pathogen Surveillance Platform – towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata

The Swiss Pathogen Surveillance Platform (SPSP) is a shared secure surveillance platform between human and veterinary medicine, to also include environmental and foodborne isolates. It enables rapid and detailed transmission monitoring and outbreak surveillance of pathogens using whole genome sequen...

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Detalles Bibliográficos
Autores principales: Neves, Aitana, Walther, Daniel, Martin-Campos, Trinidad, Barbie, Valerie, Bertelli, Claire, Blanc, Dominique, Bouchet, Gérard, Erard, Frédéric, Greub, Gilbert, Hirsch, Hans H., Huber, Michael, Kaiser, Laurent, Leib, Stephen L., Leuzinger, Karoline, Lazarevic, Vladimir, Mäusezahl, Mirjam, Molina, Jorge, Neher, Richard A., Perreten, Vincent, Ramette, Alban, Roloff, Tim, Schrenzel, Jacques, Seth-Smith, Helena M. B., Stephan, Roger, Terumalai, Dillenn, Wegner, Fanny, Egli, Adrian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2023
Materias:
Reviews
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272868/
https://www.ncbi.nlm.nih.gov/pubmed/37171846
http://dx.doi.org/10.1099/mgen.0.001001
Descripción
Sumario:The Swiss Pathogen Surveillance Platform (SPSP) is a shared secure surveillance platform between human and veterinary medicine, to also include environmental and foodborne isolates. It enables rapid and detailed transmission monitoring and outbreak surveillance of pathogens using whole genome sequencing data and associated metadata. It features controlled data access, complex dynamic queries, dedicated dashboards and automated data sharing with international repositories, providing actionable results for public health and the vision to improve societal well-being and health.

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