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Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through

[Image: see text] Plasmonic nanopores combined with Raman spectroscopy are emerging as platforms for single-molecule detection and sequencing in label-free mode. Recently, the ability of identifying single DNA bases or amino acids has been demonstrated for molecules adsorbed on plasmonic particles a...

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Autores principales: Zhao, Yingqi, Hubarevich, Aliaksandr, De Fazio, Angela Federica, Iarossi, Marzia, Huang, Jian-An, De Angelis, Francesco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273459/
https://www.ncbi.nlm.nih.gov/pubmed/37260351
http://dx.doi.org/10.1021/acs.nanolett.3c00340
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author Zhao, Yingqi
Hubarevich, Aliaksandr
De Fazio, Angela Federica
Iarossi, Marzia
Huang, Jian-An
De Angelis, Francesco
author_facet Zhao, Yingqi
Hubarevich, Aliaksandr
De Fazio, Angela Federica
Iarossi, Marzia
Huang, Jian-An
De Angelis, Francesco
author_sort Zhao, Yingqi
collection PubMed
description [Image: see text] Plasmonic nanopores combined with Raman spectroscopy are emerging as platforms for single-molecule detection and sequencing in label-free mode. Recently, the ability of identifying single DNA bases or amino acids has been demonstrated for molecules adsorbed on plasmonic particles and then delivered into the plasmonic pores. Here, we report on bowl-shaped plasmonic gold nanopores capable of direct Raman detection of single λ-DNA molecules in a flow-through scheme. The bowl shape enables the incident laser to be focused into the nanopore to generate a single intense hot spot with no cut off in pore size. Therefore, we achieved ultrasmall focusing of NIR light in a spot of 3 nm. This enabled us to detect 7 consecutive bases along the DNA chain in flow-through conditions. Furthermore, we found a novel electrofluidic mechanism to manipulate the molecular trajectory within the pore volume so that the molecule is pushed toward the hot spot, thus improving the detection efficiency.
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spelling pubmed-102734592023-06-17 Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through Zhao, Yingqi Hubarevich, Aliaksandr De Fazio, Angela Federica Iarossi, Marzia Huang, Jian-An De Angelis, Francesco Nano Lett [Image: see text] Plasmonic nanopores combined with Raman spectroscopy are emerging as platforms for single-molecule detection and sequencing in label-free mode. Recently, the ability of identifying single DNA bases or amino acids has been demonstrated for molecules adsorbed on plasmonic particles and then delivered into the plasmonic pores. Here, we report on bowl-shaped plasmonic gold nanopores capable of direct Raman detection of single λ-DNA molecules in a flow-through scheme. The bowl shape enables the incident laser to be focused into the nanopore to generate a single intense hot spot with no cut off in pore size. Therefore, we achieved ultrasmall focusing of NIR light in a spot of 3 nm. This enabled us to detect 7 consecutive bases along the DNA chain in flow-through conditions. Furthermore, we found a novel electrofluidic mechanism to manipulate the molecular trajectory within the pore volume so that the molecule is pushed toward the hot spot, thus improving the detection efficiency. American Chemical Society 2023-06-01 /pmc/articles/PMC10273459/ /pubmed/37260351 http://dx.doi.org/10.1021/acs.nanolett.3c00340 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Zhao, Yingqi
Hubarevich, Aliaksandr
De Fazio, Angela Federica
Iarossi, Marzia
Huang, Jian-An
De Angelis, Francesco
Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title_full Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title_fullStr Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title_full_unstemmed Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title_short Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through
title_sort plasmonic bowl-shaped nanopore for raman detection of single dna molecules in flow-through
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10273459/
https://www.ncbi.nlm.nih.gov/pubmed/37260351
http://dx.doi.org/10.1021/acs.nanolett.3c00340
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