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Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers

Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essent...

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Autores principales: Kitagawa, Kosaku, Kim, Kwang Su, Iwamoto, Masashi, Hayashi, Sanae, Park, Hyeongki, Nishiyama, Takara, Nakamura, Naotoshi, Fujita, Yasuhisa, Nakaoka, Shinji, Aihara, Kazuyuki, Perelson, Alan S., Allweiss, Lena, Dandri, Maura, Watashi, Koichi, Tanaka, Yasuhito, Iwami, Shingo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274663/
https://www.ncbi.nlm.nih.gov/pubmed/37333409
http://dx.doi.org/10.1101/2023.06.06.543822
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author Kitagawa, Kosaku
Kim, Kwang Su
Iwamoto, Masashi
Hayashi, Sanae
Park, Hyeongki
Nishiyama, Takara
Nakamura, Naotoshi
Fujita, Yasuhisa
Nakaoka, Shinji
Aihara, Kazuyuki
Perelson, Alan S.
Allweiss, Lena
Dandri, Maura
Watashi, Koichi
Tanaka, Yasuhito
Iwami, Shingo
author_facet Kitagawa, Kosaku
Kim, Kwang Su
Iwamoto, Masashi
Hayashi, Sanae
Park, Hyeongki
Nishiyama, Takara
Nakamura, Naotoshi
Fujita, Yasuhisa
Nakaoka, Shinji
Aihara, Kazuyuki
Perelson, Alan S.
Allweiss, Lena
Dandri, Maura
Watashi, Koichi
Tanaka, Yasuhito
Iwami, Shingo
author_sort Kitagawa, Kosaku
collection PubMed
description Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essential for developing effective treatment strategies and new drugs. However, it requires a liver biopsy to measure the intrahepatic cccDNA, which is basically not accepted because of the ethical aspect. We here aimed to develop a non-invasive method for quantifying cccDNA in the liver using surrogate markers present in peripheral blood. We constructed a multiscale mathematical model that explicitly incorporates both intracellular and intercellular HBV infection processes. The model, based on age-structured partial differential equations (PDEs), integrates experimental data from in vitro and in vivo investigations. By applying this model, we successfully predicted the amount and dynamics of intrahepatic cccDNA using specific viral markers in serum samples, including HBV DNA, HBsAg, HBeAg, and HBcrAg. Our study represents a significant step towards advancing the understanding of chronic HBV infection. The non-invasive quantification of cccDNA using our proposed methodology holds promise for improving clinical analyses and treatment strategies. By comprehensively describing the interactions of all components involved in HBV infection, our multiscale mathematical model provides a valuable framework for further research and the development of targeted interventions.
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spelling pubmed-102746632023-06-17 Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers Kitagawa, Kosaku Kim, Kwang Su Iwamoto, Masashi Hayashi, Sanae Park, Hyeongki Nishiyama, Takara Nakamura, Naotoshi Fujita, Yasuhisa Nakaoka, Shinji Aihara, Kazuyuki Perelson, Alan S. Allweiss, Lena Dandri, Maura Watashi, Koichi Tanaka, Yasuhito Iwami, Shingo bioRxiv Article Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essential for developing effective treatment strategies and new drugs. However, it requires a liver biopsy to measure the intrahepatic cccDNA, which is basically not accepted because of the ethical aspect. We here aimed to develop a non-invasive method for quantifying cccDNA in the liver using surrogate markers present in peripheral blood. We constructed a multiscale mathematical model that explicitly incorporates both intracellular and intercellular HBV infection processes. The model, based on age-structured partial differential equations (PDEs), integrates experimental data from in vitro and in vivo investigations. By applying this model, we successfully predicted the amount and dynamics of intrahepatic cccDNA using specific viral markers in serum samples, including HBV DNA, HBsAg, HBeAg, and HBcrAg. Our study represents a significant step towards advancing the understanding of chronic HBV infection. The non-invasive quantification of cccDNA using our proposed methodology holds promise for improving clinical analyses and treatment strategies. By comprehensively describing the interactions of all components involved in HBV infection, our multiscale mathematical model provides a valuable framework for further research and the development of targeted interventions. Cold Spring Harbor Laboratory 2023-06-07 /pmc/articles/PMC10274663/ /pubmed/37333409 http://dx.doi.org/10.1101/2023.06.06.543822 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Kitagawa, Kosaku
Kim, Kwang Su
Iwamoto, Masashi
Hayashi, Sanae
Park, Hyeongki
Nishiyama, Takara
Nakamura, Naotoshi
Fujita, Yasuhisa
Nakaoka, Shinji
Aihara, Kazuyuki
Perelson, Alan S.
Allweiss, Lena
Dandri, Maura
Watashi, Koichi
Tanaka, Yasuhito
Iwami, Shingo
Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title_full Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title_fullStr Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title_full_unstemmed Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title_short Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
title_sort multiscale modeling of hbv infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274663/
https://www.ncbi.nlm.nih.gov/pubmed/37333409
http://dx.doi.org/10.1101/2023.06.06.543822
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