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Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers
Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essent...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274663/ https://www.ncbi.nlm.nih.gov/pubmed/37333409 http://dx.doi.org/10.1101/2023.06.06.543822 |
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author | Kitagawa, Kosaku Kim, Kwang Su Iwamoto, Masashi Hayashi, Sanae Park, Hyeongki Nishiyama, Takara Nakamura, Naotoshi Fujita, Yasuhisa Nakaoka, Shinji Aihara, Kazuyuki Perelson, Alan S. Allweiss, Lena Dandri, Maura Watashi, Koichi Tanaka, Yasuhito Iwami, Shingo |
author_facet | Kitagawa, Kosaku Kim, Kwang Su Iwamoto, Masashi Hayashi, Sanae Park, Hyeongki Nishiyama, Takara Nakamura, Naotoshi Fujita, Yasuhisa Nakaoka, Shinji Aihara, Kazuyuki Perelson, Alan S. Allweiss, Lena Dandri, Maura Watashi, Koichi Tanaka, Yasuhito Iwami, Shingo |
author_sort | Kitagawa, Kosaku |
collection | PubMed |
description | Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essential for developing effective treatment strategies and new drugs. However, it requires a liver biopsy to measure the intrahepatic cccDNA, which is basically not accepted because of the ethical aspect. We here aimed to develop a non-invasive method for quantifying cccDNA in the liver using surrogate markers present in peripheral blood. We constructed a multiscale mathematical model that explicitly incorporates both intracellular and intercellular HBV infection processes. The model, based on age-structured partial differential equations (PDEs), integrates experimental data from in vitro and in vivo investigations. By applying this model, we successfully predicted the amount and dynamics of intrahepatic cccDNA using specific viral markers in serum samples, including HBV DNA, HBsAg, HBeAg, and HBcrAg. Our study represents a significant step towards advancing the understanding of chronic HBV infection. The non-invasive quantification of cccDNA using our proposed methodology holds promise for improving clinical analyses and treatment strategies. By comprehensively describing the interactions of all components involved in HBV infection, our multiscale mathematical model provides a valuable framework for further research and the development of targeted interventions. |
format | Online Article Text |
id | pubmed-10274663 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-102746632023-06-17 Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers Kitagawa, Kosaku Kim, Kwang Su Iwamoto, Masashi Hayashi, Sanae Park, Hyeongki Nishiyama, Takara Nakamura, Naotoshi Fujita, Yasuhisa Nakaoka, Shinji Aihara, Kazuyuki Perelson, Alan S. Allweiss, Lena Dandri, Maura Watashi, Koichi Tanaka, Yasuhito Iwami, Shingo bioRxiv Article Chronic infection of hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. The quantifying and understanding dynamics of cccDNA are essential for developing effective treatment strategies and new drugs. However, it requires a liver biopsy to measure the intrahepatic cccDNA, which is basically not accepted because of the ethical aspect. We here aimed to develop a non-invasive method for quantifying cccDNA in the liver using surrogate markers present in peripheral blood. We constructed a multiscale mathematical model that explicitly incorporates both intracellular and intercellular HBV infection processes. The model, based on age-structured partial differential equations (PDEs), integrates experimental data from in vitro and in vivo investigations. By applying this model, we successfully predicted the amount and dynamics of intrahepatic cccDNA using specific viral markers in serum samples, including HBV DNA, HBsAg, HBeAg, and HBcrAg. Our study represents a significant step towards advancing the understanding of chronic HBV infection. The non-invasive quantification of cccDNA using our proposed methodology holds promise for improving clinical analyses and treatment strategies. By comprehensively describing the interactions of all components involved in HBV infection, our multiscale mathematical model provides a valuable framework for further research and the development of targeted interventions. Cold Spring Harbor Laboratory 2023-06-07 /pmc/articles/PMC10274663/ /pubmed/37333409 http://dx.doi.org/10.1101/2023.06.06.543822 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Kitagawa, Kosaku Kim, Kwang Su Iwamoto, Masashi Hayashi, Sanae Park, Hyeongki Nishiyama, Takara Nakamura, Naotoshi Fujita, Yasuhisa Nakaoka, Shinji Aihara, Kazuyuki Perelson, Alan S. Allweiss, Lena Dandri, Maura Watashi, Koichi Tanaka, Yasuhito Iwami, Shingo Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title | Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title_full | Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title_fullStr | Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title_full_unstemmed | Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title_short | Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
title_sort | multiscale modeling of hbv infection integrating intra- and intercellular viral propagation for analyzing extracellular viral markers |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274663/ https://www.ncbi.nlm.nih.gov/pubmed/37333409 http://dx.doi.org/10.1101/2023.06.06.543822 |
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