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Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia

Environmental risk assessment is a critical tool for protecting biodiversity and its effectiveness is predicated on predicting how natural populations respond to environmental stressors. Yet, routine toxicity testing typically examines only one genotype, which may render risk assessments inaccurate...

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Autores principales: Shahmohamadloo, René S., Rudman, Seth M., Clare, Catherine I., Westrick, Judy A., De Meester, Luc, Fryxell, John M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274664/
https://www.ncbi.nlm.nih.gov/pubmed/37333160
http://dx.doi.org/10.1101/2023.06.06.543817
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author Shahmohamadloo, René S.
Rudman, Seth M.
Clare, Catherine I.
Westrick, Judy A.
De Meester, Luc
Fryxell, John M.
author_facet Shahmohamadloo, René S.
Rudman, Seth M.
Clare, Catherine I.
Westrick, Judy A.
De Meester, Luc
Fryxell, John M.
author_sort Shahmohamadloo, René S.
collection PubMed
description Environmental risk assessment is a critical tool for protecting biodiversity and its effectiveness is predicated on predicting how natural populations respond to environmental stressors. Yet, routine toxicity testing typically examines only one genotype, which may render risk assessments inaccurate at the population scale. To determine the importance of intraspecific variation in the translation of toxicity testing to populations, we quantified the magnitude of genetic variation within 20 Daphnia magna clones derived from one lake using whole genome sequencing and phenotypic assays. We repeated these assays across two exposure levels of Microcystis aeruginosa, a cosmopolitan freshwater contaminant. We found considerable intraspecific genetic variation in survival, growth, and reproduction. Exposure to Microcystis amplified the degree of intraspecific variation. Simulations demonstrate assays employing one clone failed to produce an estimate within the 95% confidence interval over half of the time. These results illuminate the importance of incorporating intraspecific genetic variation, but not necessarily genome sequences, into toxicity testing to reliably predict how natural populations will respond to environmental stressors.
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spelling pubmed-102746642023-06-17 Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia Shahmohamadloo, René S. Rudman, Seth M. Clare, Catherine I. Westrick, Judy A. De Meester, Luc Fryxell, John M. bioRxiv Article Environmental risk assessment is a critical tool for protecting biodiversity and its effectiveness is predicated on predicting how natural populations respond to environmental stressors. Yet, routine toxicity testing typically examines only one genotype, which may render risk assessments inaccurate at the population scale. To determine the importance of intraspecific variation in the translation of toxicity testing to populations, we quantified the magnitude of genetic variation within 20 Daphnia magna clones derived from one lake using whole genome sequencing and phenotypic assays. We repeated these assays across two exposure levels of Microcystis aeruginosa, a cosmopolitan freshwater contaminant. We found considerable intraspecific genetic variation in survival, growth, and reproduction. Exposure to Microcystis amplified the degree of intraspecific variation. Simulations demonstrate assays employing one clone failed to produce an estimate within the 95% confidence interval over half of the time. These results illuminate the importance of incorporating intraspecific genetic variation, but not necessarily genome sequences, into toxicity testing to reliably predict how natural populations will respond to environmental stressors. Cold Spring Harbor Laboratory 2023-06-07 /pmc/articles/PMC10274664/ /pubmed/37333160 http://dx.doi.org/10.1101/2023.06.06.543817 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Shahmohamadloo, René S.
Rudman, Seth M.
Clare, Catherine I.
Westrick, Judy A.
De Meester, Luc
Fryxell, John M.
Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title_full Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title_fullStr Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title_full_unstemmed Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title_short Intraspecific genetic variation is critical to robust toxicological predictions in Daphnia
title_sort intraspecific genetic variation is critical to robust toxicological predictions in daphnia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274664/
https://www.ncbi.nlm.nih.gov/pubmed/37333160
http://dx.doi.org/10.1101/2023.06.06.543817
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