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Brewing COFFEE: A sequence-specific coarse-grained energy function for simulations of DNA-protein complexes

DNA-protein interactions are pervasive in a number of biophysical processes ranging from transcription, gene expression, to chromosome folding. To describe the structural and dynamic properties underlying these processes accurately, it is important to create transferable computational models. Toward...

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Detalles Bibliográficos
Autores principales: Chakraborty, Debayan, Mondal, Balaka, Thirumalai, D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274755/
https://www.ncbi.nlm.nih.gov/pubmed/37333386
http://dx.doi.org/10.1101/2023.06.07.544064