Cargando…

Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes

The frequent exchange of mobile genetic elements (MGEs) between bacteria accelerates the spread of functional traits, including antimicrobial resistance, within the human microbiome. Yet, progress in understanding these intricate processes has been hindered by the lack of tools to map the spatial sp...

Descripción completa

Detalles Bibliográficos
Autores principales:	Grodner, Benjamin, Shi, Hao, Farchione, Owen, Vill, Albert C., Ntekas, Ioannis, Diebold, Peter J., Zipfel, Warren R., Brito, Ilana L., Vlaminck, Iwijn De
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274929/ https://www.ncbi.nlm.nih.gov/pubmed/37333098 http://dx.doi.org/10.1101/2023.06.09.544291

Ejemplares similares

Highly Multiplexed Spatial Mapping of Microbial Communities
por: Shi, Hao, et al.
Publicado: (2020)

Widespread transfer of mobile antibiotic resistance genes within individual gut microbiomes revealed through bacterial Hi-C
por: Kent, Alyssa G., et al.
Publicado: (2020)

Spatiotemporal single-cell RNA sequencing of developing chicken hearts identifies interplay between cellular differentiation and morphogenesis
por: Mantri, Madhav, et al.
Publicado: (2021)

Spatial mapping of the total transcriptome by in situ polyadenylation
por: McKellar, David W., et al.
Publicado: (2022)

Biopsy‐free screening for glioma
por: Cheng, Alexandre Pellan, et al.
Publicado: (2018)

Adding Insult on Injury: Immunogenic Role for Donor-derived Cell-free DNA?
por: Dholakia, Shamik, et al.
Publicado: (2020)

Mobile Gene Sequence Evolution within Individual Human Gut Microbiomes Is Better Explained by Gene-Specific Than Host-Specific Selective Pressures
por: N’Guessan, Arnaud, et al.
Publicado: (2021)

A mobile genetic element increases bacterial host fitness by manipulating development
por: Jones, Joshua M, et al.
Publicado: (2021)

Ah Receptor Binding to its Cognate Response Element is Required for Dioxin-Mediated Toxicity
por: Perdew, Gary H.
Publicado: (2008)

Host-microbiome protein-protein interactions capture disease-relevant pathways
por: Zhou, Hao, et al.
Publicado: (2022)

On the Contribution of Protein Spatial Organization to the Physicochemical Interconnection between Proteins and Their Cognate mRNAs
por: Beier, Andreas, et al.
Publicado: (2014)

Skewed Brownian Fluctuations in Single-Molecule Magnetic Tweezers
por: Burnham, Daniel R., et al.
Publicado: (2014)

The application of statistical methods to cognate docking: A path forward?
por: Stahl, Gunther, et al.
Publicado: (2014)

Stammering and Cognate Defects of Speech
Publicado: (1914)

Discovery of Genes Activated by the Mitochondrial Unfolded Protein Response (mtUPR) and Cognate Promoter Elements
por: Aldridge, Jonathan E., et al.
Publicado: (2007)

Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants
por: Lee, Dongwon, et al.
Publicado: (2018)

Non-retroviral Endogenous Viral Element Limits Cognate Virus Replication in Aedes aegypti Ovaries
por: Suzuki, Yasutsugu, et al.
Publicado: (2020)

The internationalization of human microbiome research
por: Porras, Ana Maria, et al.
Publicado: (2019)

Rapid video-based deep learning of cognate versus non-cognate T cell-dendritic cell interactions
por: Anandakumaran, Priya N., et al.
Publicado: (2022)

Legionella Metaeffector Exploits Host Proteasome to Temporally Regulate Cognate Effector
por: Kubori, Tomoko, et al.
Publicado: (2010)

COGNATE: comparative gene annotation characterizer
por: Wilbrandt, Jeanne, et al.
Publicado: (2017)

Linking plasmid-based beta-lactamases to their bacterial hosts using single-cell fusion PCR
por: Diebold, Peter J, et al.
Publicado: (2021)

Prophages encode phage-defense systems with cognate self-immunity
por: Owen, Siân V., et al.
Publicado: (2021)

Ah receptor represses acute phase response gene expression without binding to its cognate response element
por: Patel, Rushang D., et al.
Publicado: (2009)

Identification and Characterization of the Cognate Anti-Sigma Factor and Specific Promoter Elements of a T. tengcongensis ECF Sigma Factor
por: Liu, Jingfang, et al.
Publicado: (2012)

A Spatiotemporal Molecular Atlas of the Ovulating Mouse Ovary
por: Mantri, Madhav, et al.
Publicado: (2023)

Tracking Strains in the Microbiome: Insights from Metagenomics and Models
por: Brito, Ilana L., et al.
Publicado: (2016)

Autoantibodies in chronic graft versus host result from cognate T-B interactions
Publicado: (1990)

Propeptide-Mediated Inhibition of Cognate Gingipain Proteinases
por: Huq, N. Laila, et al.
Publicado: (2013)

Old Notes on Malarial Fevers and Cognate Ailments
por: Meredith, John
Publicado: (1874)

Old Notes on Malarial Fevers and Cognate Ailments
por: Meredith, John
Publicado: (1873)

Magnetic Forces and DNA Mechanics in Multiplexed Magnetic Tweezers
por: De Vlaminck, Iwijn, et al.
Publicado: (2012)

Annealing helicase HARP closes RPA-stabilized DNA bubbles non-processively
por: Burnham, Daniel R., et al.
Publicado: (2017)

Donor-derived, cell-free DNA levels by next-generation targeted sequencing are elevated in allograft rejection after lung transplantation
por: Khush, Kiran K., et al.
Publicado: (2021)

Effects of cognate, non-cognate and synthetic CXCR4 and ACKR3 ligands on human lung endothelial cell barrier function
por: Cheng, You-Hong, et al.
Publicado: (2017)

Strain-level characterization of broad host range mobile genetic elements transferring antibiotic resistance from the human microbiome
por: Forster, Samuel C., et al.
Publicado: (2022)

PROCOGNATE: a cognate ligand domain mapping for enzymes
por: Bashton, Matthew, et al.
Publicado: (2008)

Protective molecules and their cognate antibodies: new players in autoimmunity
por: Zen, Margherita, et al.
Publicado: (2010)

Near-Cognate Codons Contribute Complexity to Translation Regulation
por: Glass, N. Louise
Publicado: (2017)

Quantification of interacting cognate odorants with olfactory receptors in nanovesicles
por: Sanmartí-Espinal, Marta, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_2dp3m2m0rc75g0u6nqsu3ku3d5