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Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing

In recent decades, the development of new drugs has become increasingly expensive and inefficient, and the molecular mechanisms of most pharmaceuticals remain poorly understood. In response, computational systems and network medicine tools have emerged to identify potential drug repurposing candidat...

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Autores principales: Maier, Andreas, Hartung, Michael, Abovsky, Mark, Adamowicz, Klaudia, Bader, Gary D., Baier, Sylvie, Blumenthal, David B., Chen, Jing, Elkjaer, Maria L., Garcia-Hernandez, Carlos, Helmy, Mohamed, Hoffmann, Markus, Jurisica, Igor, Kotlyar, Max, Lazareva, Olga, Levi, Hagai, List, Markus, Lobentanzer, Sebastian, Loscalzo, Joseph, Malod-Dognin, Noel, Manz, Quirin, Matschinske, Julian, Mee, Miles, Oubounyt, Mhaned, Pico, Alexander R., Pillich, Rudolf T., Poschenrieder, Julian M., Pratt, Dexter, Pržulj, Nataša, Sadegh, Sepideh, Saez-Rodriguez, Julio, Sarkar, Suryadipto, Shaked, Gideon, Shamir, Ron, Trummer, Nico, Turhan, Ugur, Wang, Ruisheng, Zolotareva, Olga, Baumbach, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cornell University 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274948/
https://www.ncbi.nlm.nih.gov/pubmed/37332567
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author Maier, Andreas
Hartung, Michael
Abovsky, Mark
Adamowicz, Klaudia
Bader, Gary D.
Baier, Sylvie
Blumenthal, David B.
Chen, Jing
Elkjaer, Maria L.
Garcia-Hernandez, Carlos
Helmy, Mohamed
Hoffmann, Markus
Jurisica, Igor
Kotlyar, Max
Lazareva, Olga
Levi, Hagai
List, Markus
Lobentanzer, Sebastian
Loscalzo, Joseph
Malod-Dognin, Noel
Manz, Quirin
Matschinske, Julian
Mee, Miles
Oubounyt, Mhaned
Pico, Alexander R.
Pillich, Rudolf T.
Poschenrieder, Julian M.
Pratt, Dexter
Pržulj, Nataša
Sadegh, Sepideh
Saez-Rodriguez, Julio
Sarkar, Suryadipto
Shaked, Gideon
Shamir, Ron
Trummer, Nico
Turhan, Ugur
Wang, Ruisheng
Zolotareva, Olga
Baumbach, Jan
author_facet Maier, Andreas
Hartung, Michael
Abovsky, Mark
Adamowicz, Klaudia
Bader, Gary D.
Baier, Sylvie
Blumenthal, David B.
Chen, Jing
Elkjaer, Maria L.
Garcia-Hernandez, Carlos
Helmy, Mohamed
Hoffmann, Markus
Jurisica, Igor
Kotlyar, Max
Lazareva, Olga
Levi, Hagai
List, Markus
Lobentanzer, Sebastian
Loscalzo, Joseph
Malod-Dognin, Noel
Manz, Quirin
Matschinske, Julian
Mee, Miles
Oubounyt, Mhaned
Pico, Alexander R.
Pillich, Rudolf T.
Poschenrieder, Julian M.
Pratt, Dexter
Pržulj, Nataša
Sadegh, Sepideh
Saez-Rodriguez, Julio
Sarkar, Suryadipto
Shaked, Gideon
Shamir, Ron
Trummer, Nico
Turhan, Ugur
Wang, Ruisheng
Zolotareva, Olga
Baumbach, Jan
author_sort Maier, Andreas
collection PubMed
description In recent decades, the development of new drugs has become increasingly expensive and inefficient, and the molecular mechanisms of most pharmaceuticals remain poorly understood. In response, computational systems and network medicine tools have emerged to identify potential drug repurposing candidates. However, these tools often require complex installation and lack intuitive visual network mining capabilities. To tackle these challenges, we introduce Drugst.One, a platform that assists specialized computational medicine tools in becoming user-friendly, web-based utilities for drug repurposing. With just three lines of code, Drugst.One turns any systems biology software into an interactive web tool for modeling and analyzing complex protein-drug-disease networks. Demonstrating its broad adaptability, Drugst.One has been successfully integrated with 21 computational systems medicine tools. Available at https://drugst.one, Drugst.One has significant potential for streamlining the drug discovery process, allowing researchers to focus on essential aspects of pharmaceutical treatment research.
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spelling pubmed-102749482023-06-17 Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing Maier, Andreas Hartung, Michael Abovsky, Mark Adamowicz, Klaudia Bader, Gary D. Baier, Sylvie Blumenthal, David B. Chen, Jing Elkjaer, Maria L. Garcia-Hernandez, Carlos Helmy, Mohamed Hoffmann, Markus Jurisica, Igor Kotlyar, Max Lazareva, Olga Levi, Hagai List, Markus Lobentanzer, Sebastian Loscalzo, Joseph Malod-Dognin, Noel Manz, Quirin Matschinske, Julian Mee, Miles Oubounyt, Mhaned Pico, Alexander R. Pillich, Rudolf T. Poschenrieder, Julian M. Pratt, Dexter Pržulj, Nataša Sadegh, Sepideh Saez-Rodriguez, Julio Sarkar, Suryadipto Shaked, Gideon Shamir, Ron Trummer, Nico Turhan, Ugur Wang, Ruisheng Zolotareva, Olga Baumbach, Jan ArXiv Article In recent decades, the development of new drugs has become increasingly expensive and inefficient, and the molecular mechanisms of most pharmaceuticals remain poorly understood. In response, computational systems and network medicine tools have emerged to identify potential drug repurposing candidates. However, these tools often require complex installation and lack intuitive visual network mining capabilities. To tackle these challenges, we introduce Drugst.One, a platform that assists specialized computational medicine tools in becoming user-friendly, web-based utilities for drug repurposing. With just three lines of code, Drugst.One turns any systems biology software into an interactive web tool for modeling and analyzing complex protein-drug-disease networks. Demonstrating its broad adaptability, Drugst.One has been successfully integrated with 21 computational systems medicine tools. Available at https://drugst.one, Drugst.One has significant potential for streamlining the drug discovery process, allowing researchers to focus on essential aspects of pharmaceutical treatment research. Cornell University 2023-07-04 /pmc/articles/PMC10274948/ /pubmed/37332567 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Maier, Andreas
Hartung, Michael
Abovsky, Mark
Adamowicz, Klaudia
Bader, Gary D.
Baier, Sylvie
Blumenthal, David B.
Chen, Jing
Elkjaer, Maria L.
Garcia-Hernandez, Carlos
Helmy, Mohamed
Hoffmann, Markus
Jurisica, Igor
Kotlyar, Max
Lazareva, Olga
Levi, Hagai
List, Markus
Lobentanzer, Sebastian
Loscalzo, Joseph
Malod-Dognin, Noel
Manz, Quirin
Matschinske, Julian
Mee, Miles
Oubounyt, Mhaned
Pico, Alexander R.
Pillich, Rudolf T.
Poschenrieder, Julian M.
Pratt, Dexter
Pržulj, Nataša
Sadegh, Sepideh
Saez-Rodriguez, Julio
Sarkar, Suryadipto
Shaked, Gideon
Shamir, Ron
Trummer, Nico
Turhan, Ugur
Wang, Ruisheng
Zolotareva, Olga
Baumbach, Jan
Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title_full Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title_fullStr Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title_full_unstemmed Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title_short Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing
title_sort drugst.one - a plug-and-play solution for online systems medicine and network-based drug repurposing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10274948/
https://www.ncbi.nlm.nih.gov/pubmed/37332567
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