Cargando…

Anionic G•U pairs in bacterial ribosomal rRNAs

Wobble GU pairs (or G•U) occur frequently within double-stranded RNA helices interspersed between standard G=C and A-U Watson–Crick pairs. Another type of G•U pair interacting via their Watson–Crick edges has been observed in the A site of ribosome structures between a modified U34 in the tRNA antic...

Descripción completa

Detalles Bibliográficos
Autores principales:	Westhof, Eric, Watson, Zoe L., Zirbel, Craig L., Cate, Jamie H.D.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2023
Materias:	Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10275268/ https://www.ncbi.nlm.nih.gov/pubmed/37068913 http://dx.doi.org/10.1261/rna.079583.123

Ejemplares similares

Structure of the bacterial ribosome at 2 Å resolution
por: Watson, Zoe L, et al.
Publicado: (2020)

Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes
por: Zhang, Xing, et al.
Publicado: (2016)

Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria
por: Rozov, Alexey, et al.
Publicado: (2018)

Functional conservation of specialized ribosomes bearing genome-encoded variant rRNAs in Vibrio species
por: Choi, Younkyung, et al.
Publicado: (2023)

Organelle evolution, fragmented rRNAs, and Carl
por: Gray, Michael W
Publicado: (2014)

Frequency and isostericity of RNA base pairs
por: Stombaugh, Jesse, et al.
Publicado: (2009)

How to fold and protect mitochondrial ribosomal RNA with fewer guanines
por: Hosseini, Maryam, et al.
Publicado: (2018)

Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome
por: Nissley, Amos J, et al.
Publicado: (2023)

Chemical footprinting reveals conformational changes of 18S and 28S rRNAs at different steps of translation termination on the human ribosome
por: Bulygin, Konstantin N., et al.
Publicado: (2016)

Secondary structure and domain architecture of the 23S and 5S rRNAs
por: Petrov, Anton S., et al.
Publicado: (2013)

Mechanistic Insight into the Reactivation of BCAII Enzyme from Denatured and Molten Globule States by Eukaryotic Ribosomes and Domain V rRNAs
por: Chakraborty, Biprashekhar, et al.
Publicado: (2016)

Secondary Structures of rRNAs from All Three Domains of Life
por: Petrov, Anton S., et al.
Publicado: (2014)

Opposite regulation of piRNAs, rRNAs and miRNAs in the blood after subarachnoid hemorrhage
por: Morga, Rafal, et al.
Publicado: (2020)

Upon heat stress processing of ribosomal RNA precursors into mature rRNAs is compromised after cleavage at primary P site in Arabidopsis thaliana
por: Darriere, T., et al.
Publicado: (2022)

The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix
por: Rozov, Alexey, et al.
Publicado: (2016)

Extensive terminal and asymmetric processing of small RNAs from rRNAs, snoRNAs, snRNAs, and tRNAs
por: Li, Zhihua, et al.
Publicado: (2012)

Comparative RNA function analysis reveals high functional similarity between distantly related bacterial 16 S rRNAs
por: Tsukuda, Miyuki, et al.
Publicado: (2017)

Interactions between terminal ribosomal RNA helices stabilize the E. coli large ribosomal subunit
por: Nissley, Amos J., et al.
Publicado: (2023)

Widespread occurrence of organelle genome-encoded 5S rRNAs including permuted molecules
por: Valach, Matus, et al.
Publicado: (2014)

Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA
por: Wu, Jian, et al.
Publicado: (2020)

Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA
por: Wu, Jian, et al.
Publicado: (2020)

Characterization of Small RNAs Derived from tRNAs, rRNAs and snoRNAs and Their Response to Heat Stress in Wheat Seedlings
por: Wang, Yu, et al.
Publicado: (2016)

Control of Maize Vegetative and Reproductive Development, Fertility, and rRNAs Silencing by HISTONE DEACETYLASE 108
por: Forestan, Cristian, et al.
Publicado: (2018)

Poly(A)-specific ribonuclease regulates the processing of small-subunit rRNAs in human cells
por: Ishikawa, Hideaki, et al.
Publicado: (2017)

The multiple flavors of GoU pairs in RNA
por: Westhof, Eric, et al.
Publicado: (2019)

Stabilization of ribozyme-like cis-noncoding rRNAs induces apoptotic and nonapoptotic death in lung cells
por: Gee, M, et al.
Publicado: (2012)

PCR Primer Design for 16S rRNAs for Experimental Horizontal Gene Transfer Test in Escherichia coli
por: Miyazaki, Kentaro, et al.
Publicado: (2017)

Occurrence of randomly recombined functional 16S rRNA genes in Thermus thermophilus suggests genetic interoperability and promiscuity of bacterial 16S rRNAs
por: Miyazaki, Kentaro, et al.
Publicado: (2019)

The amazing world of bacterial structured RNAs
por: Westhof, Eric
Publicado: (2010)

The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates
por: Kondo, Jiro, et al.
Publicado: (2008)

Human nucleolar protein Nop52 (RRP1/NNP-1) is involved in site 2 cleavage in internal transcribed spacer 1 of pre-rRNAs at early stages of ribosome biogenesis
por: Yoshikawa, Harunori, et al.
Publicado: (2015)

Lone Pair…π Contacts and Structure Signatures of r(UNCG) Tetraloops, Z-Turns, and Z-Steps: A WebFR3D Survey
por: Zirbel, Craig L., et al.
Publicado: (2022)

Presence of Pre-rRNAs before Activation of Polymerase I Transcription in the Building Process of Nucleoli during Early Development of Xenopus laevis
por: Verheggen, Céline, et al.
Publicado: (1998)

Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition
por: Travin, Dmitrii Y., et al.
Publicado: (2019)

Small RNAs derived from tRNAs and rRNAs are highly enriched in exosomes from both old and new world Leishmania providing evidence for conserved exosomal RNA Packaging
por: Lambertz, Ulrike, et al.
Publicado: (2015)

Chromosomal organization of the 18S and 5S rRNAs and histone H3 genes in Scarabaeinae coleopterans: insights into the evolutionary dynamics of multigene families and heterochromatin
por: Cabral-de-Mello, Diogo C, et al.
Publicado: (2011)

The electrostatic characteristics of G·U wobble base pairs
por: Xu, Darui, et al.
Publicado: (2007)

Atomistic simulations of the Escherichia coli ribosome provide selection criteria for translationally active substrates
por: Watson, Zoe L., et al.
Publicado: (2023)

Comparing FRET pairs that report on intersubunit rotation in bacterial ribosomes
por: Das, Ananya, et al.
Publicado: (2023)

eIF3 targets cell proliferation mRNAs for translational activation or repression
por: Lee, Amy S.Y., et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_e5g0fcjm34ojjl5bresp3h4klm