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Soybean leaf estimation based on RGB images and machine learning methods

BACKGROUND: RGB photographs are a powerful tool for dynamically estimating crop growth. Leaves are related to crop photosynthesis, transpiration, and nutrient uptake. Traditional blade parameter measurements were labor-intensive and time-consuming. Therefore, based on the phenotypic features extract...

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Autores principales: Li, Xiuni, Xu, Xiangyao, Xiang, Shuai, Chen, Menggen, He, Shuyuan, Wang, Wenyan, Xu, Mei, Liu, Chunyan, Yu, Liang, Liu, Weiguo, Yang, Wenyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276400/
https://www.ncbi.nlm.nih.gov/pubmed/37330499
http://dx.doi.org/10.1186/s13007-023-01023-z
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author Li, Xiuni
Xu, Xiangyao
Xiang, Shuai
Chen, Menggen
He, Shuyuan
Wang, Wenyan
Xu, Mei
Liu, Chunyan
Yu, Liang
Liu, Weiguo
Yang, Wenyu
author_facet Li, Xiuni
Xu, Xiangyao
Xiang, Shuai
Chen, Menggen
He, Shuyuan
Wang, Wenyan
Xu, Mei
Liu, Chunyan
Yu, Liang
Liu, Weiguo
Yang, Wenyu
author_sort Li, Xiuni
collection PubMed
description BACKGROUND: RGB photographs are a powerful tool for dynamically estimating crop growth. Leaves are related to crop photosynthesis, transpiration, and nutrient uptake. Traditional blade parameter measurements were labor-intensive and time-consuming. Therefore, based on the phenotypic features extracted from RGB images, it is essential to choose the best model for soybean leaf parameter estimation. This research was carried out to speed up the breeding procedure and provide a novel technique for precisely estimating soybean leaf parameters. RESULTS: The findings demonstrate that using an Unet neural network, the IOU, PA, and Recall values for soybean image segmentation can achieve 0.98, 0.99, and 0.98, respectively. Overall, the average testing prediction accuracy (ATPA) of the three regression models is Random forest > Cat Boost > Simple nonlinear regression. The Random forest ATPAs for leaf number (LN), leaf fresh weight (LFW), and leaf area index (LAI) reached 73.45%, 74.96%, and 85.09%, respectively, which were 6.93%, 3.98%, and 8.01%, respectively, higher than those of the optimal Cat Boost model and 18.78%, 19.08%, and 10.88%, respectively, higher than those of the optimal SNR model. CONCLUSION: The results show that the Unet neural network can separate soybeans accurately from an RGB image. The Random forest model has a strong ability for generalization and high accuracy for the estimation of leaf parameters. Combining cutting-edge machine learning methods with digital images improves the estimation of soybean leaf characteristics. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-023-01023-z.
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spelling pubmed-102764002023-06-18 Soybean leaf estimation based on RGB images and machine learning methods Li, Xiuni Xu, Xiangyao Xiang, Shuai Chen, Menggen He, Shuyuan Wang, Wenyan Xu, Mei Liu, Chunyan Yu, Liang Liu, Weiguo Yang, Wenyu Plant Methods Research BACKGROUND: RGB photographs are a powerful tool for dynamically estimating crop growth. Leaves are related to crop photosynthesis, transpiration, and nutrient uptake. Traditional blade parameter measurements were labor-intensive and time-consuming. Therefore, based on the phenotypic features extracted from RGB images, it is essential to choose the best model for soybean leaf parameter estimation. This research was carried out to speed up the breeding procedure and provide a novel technique for precisely estimating soybean leaf parameters. RESULTS: The findings demonstrate that using an Unet neural network, the IOU, PA, and Recall values for soybean image segmentation can achieve 0.98, 0.99, and 0.98, respectively. Overall, the average testing prediction accuracy (ATPA) of the three regression models is Random forest > Cat Boost > Simple nonlinear regression. The Random forest ATPAs for leaf number (LN), leaf fresh weight (LFW), and leaf area index (LAI) reached 73.45%, 74.96%, and 85.09%, respectively, which were 6.93%, 3.98%, and 8.01%, respectively, higher than those of the optimal Cat Boost model and 18.78%, 19.08%, and 10.88%, respectively, higher than those of the optimal SNR model. CONCLUSION: The results show that the Unet neural network can separate soybeans accurately from an RGB image. The Random forest model has a strong ability for generalization and high accuracy for the estimation of leaf parameters. Combining cutting-edge machine learning methods with digital images improves the estimation of soybean leaf characteristics. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-023-01023-z. BioMed Central 2023-06-17 /pmc/articles/PMC10276400/ /pubmed/37330499 http://dx.doi.org/10.1186/s13007-023-01023-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Li, Xiuni
Xu, Xiangyao
Xiang, Shuai
Chen, Menggen
He, Shuyuan
Wang, Wenyan
Xu, Mei
Liu, Chunyan
Yu, Liang
Liu, Weiguo
Yang, Wenyu
Soybean leaf estimation based on RGB images and machine learning methods
title Soybean leaf estimation based on RGB images and machine learning methods
title_full Soybean leaf estimation based on RGB images and machine learning methods
title_fullStr Soybean leaf estimation based on RGB images and machine learning methods
title_full_unstemmed Soybean leaf estimation based on RGB images and machine learning methods
title_short Soybean leaf estimation based on RGB images and machine learning methods
title_sort soybean leaf estimation based on rgb images and machine learning methods
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276400/
https://www.ncbi.nlm.nih.gov/pubmed/37330499
http://dx.doi.org/10.1186/s13007-023-01023-z
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