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Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother

Birds are often obligate to specific habitats which can result in study areas with complex boundaries due to sudden changes in vegetation or other features. This can result in study areas with concave arcs or that include holes of unsuitable habitat such as lakes or agricultural fields. Spatial mode...

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Autores principales: Camp, Richard J., Miller, David L., Buckland, Stephen T., Kendall, Steve J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276562/
https://www.ncbi.nlm.nih.gov/pubmed/37334130
http://dx.doi.org/10.7717/peerj.15558
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author Camp, Richard J.
Miller, David L.
Buckland, Stephen T.
Kendall, Steve J.
author_facet Camp, Richard J.
Miller, David L.
Buckland, Stephen T.
Kendall, Steve J.
author_sort Camp, Richard J.
collection PubMed
description Birds are often obligate to specific habitats which can result in study areas with complex boundaries due to sudden changes in vegetation or other features. This can result in study areas with concave arcs or that include holes of unsuitable habitat such as lakes or agricultural fields. Spatial models used to produce species’ distribution and density estimates need to respect such boundaries to make informed decisions for species conservation and management. The soap film smoother is one model for complex study regions which controls the boundary behaviour, ensuring realistic values at the edges of the region. We apply the soap film smoother to account for boundary effects and compare it with thin plate regression spline (TPRS) smooth and design-based conventional distance sampling methods to produce abundance estimates from point-transect distance sampling collected data on Hawai‘i ‘Ākepa Loxops coccineus in the Hakalau Forest Unit of the Big Island National Wildlife Refuge Complex, Hawai‘i Island, USA. The soap film smoother predicted zero or near zero densities in the northern part of the domain and two hotspots (in the southern and central parts of the domain). Along the boundary the soap film model predicted relatively high densities where ‘Ākepa occur in the adjacent forest and near zero elsewhere. The design-based and soap film abundance estimates were nearly identical. The width of the soap film confidence interval was 16.5% and 0.8% wider than the width of the TPRS smooth and design-based confidence intervals, respectively. The peaks in predicted densities along the boundary indicates leakage by the TPRS smooth. We provide a discussion of the statistical methods, biological findings and management implications of applying soap film smoothers to estimate forest bird population status.
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spelling pubmed-102765622023-06-18 Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother Camp, Richard J. Miller, David L. Buckland, Stephen T. Kendall, Steve J. PeerJ Conservation Biology Birds are often obligate to specific habitats which can result in study areas with complex boundaries due to sudden changes in vegetation or other features. This can result in study areas with concave arcs or that include holes of unsuitable habitat such as lakes or agricultural fields. Spatial models used to produce species’ distribution and density estimates need to respect such boundaries to make informed decisions for species conservation and management. The soap film smoother is one model for complex study regions which controls the boundary behaviour, ensuring realistic values at the edges of the region. We apply the soap film smoother to account for boundary effects and compare it with thin plate regression spline (TPRS) smooth and design-based conventional distance sampling methods to produce abundance estimates from point-transect distance sampling collected data on Hawai‘i ‘Ākepa Loxops coccineus in the Hakalau Forest Unit of the Big Island National Wildlife Refuge Complex, Hawai‘i Island, USA. The soap film smoother predicted zero or near zero densities in the northern part of the domain and two hotspots (in the southern and central parts of the domain). Along the boundary the soap film model predicted relatively high densities where ‘Ākepa occur in the adjacent forest and near zero elsewhere. The design-based and soap film abundance estimates were nearly identical. The width of the soap film confidence interval was 16.5% and 0.8% wider than the width of the TPRS smooth and design-based confidence intervals, respectively. The peaks in predicted densities along the boundary indicates leakage by the TPRS smooth. We provide a discussion of the statistical methods, biological findings and management implications of applying soap film smoothers to estimate forest bird population status. PeerJ Inc. 2023-06-14 /pmc/articles/PMC10276562/ /pubmed/37334130 http://dx.doi.org/10.7717/peerj.15558 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, made available under the Creative Commons Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) . This work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Conservation Biology
Camp, Richard J.
Miller, David L.
Buckland, Stephen T.
Kendall, Steve J.
Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title_full Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title_fullStr Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title_full_unstemmed Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title_short Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
title_sort accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: inferences from a soap film smoother
topic Conservation Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276562/
https://www.ncbi.nlm.nih.gov/pubmed/37334130
http://dx.doi.org/10.7717/peerj.15558
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