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Structure and proposed DNA delivery mechanism of a marine roseophage

Tailed bacteriophages (order, Caudovirales) account for the majority of all phages. However, the long flexible tail of siphophages hinders comprehensive investigation of the mechanism of viral gene delivery. Here, we report the atomic capsid and in-situ structures of the tail machine of the marine s...

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Autores principales: Huang, Yang, Sun, Hui, Wei, Shuzhen, Cai, Lanlan, Liu, Liqin, Jiang, Yanan, Xin, Jiabao, Chen, Zhenqin, Que, Yuqiong, Kong, Zhibo, Li, Tingting, Yu, Hai, Zhang, Jun, Gu, Ying, Zheng, Qingbing, Li, Shaowei, Zhang, Rui, Xia, Ningshao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276861/
https://www.ncbi.nlm.nih.gov/pubmed/37330604
http://dx.doi.org/10.1038/s41467-023-39220-y
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author Huang, Yang
Sun, Hui
Wei, Shuzhen
Cai, Lanlan
Liu, Liqin
Jiang, Yanan
Xin, Jiabao
Chen, Zhenqin
Que, Yuqiong
Kong, Zhibo
Li, Tingting
Yu, Hai
Zhang, Jun
Gu, Ying
Zheng, Qingbing
Li, Shaowei
Zhang, Rui
Xia, Ningshao
author_facet Huang, Yang
Sun, Hui
Wei, Shuzhen
Cai, Lanlan
Liu, Liqin
Jiang, Yanan
Xin, Jiabao
Chen, Zhenqin
Que, Yuqiong
Kong, Zhibo
Li, Tingting
Yu, Hai
Zhang, Jun
Gu, Ying
Zheng, Qingbing
Li, Shaowei
Zhang, Rui
Xia, Ningshao
author_sort Huang, Yang
collection PubMed
description Tailed bacteriophages (order, Caudovirales) account for the majority of all phages. However, the long flexible tail of siphophages hinders comprehensive investigation of the mechanism of viral gene delivery. Here, we report the atomic capsid and in-situ structures of the tail machine of the marine siphophage, vB_DshS-R4C (R4C), which infects Roseobacter. The R4C virion, comprising 12 distinct structural protein components, has a unique five-fold vertex of the icosahedral capsid that allows genome delivery. The specific position and interaction pattern of the tail tube proteins determine the atypical long rigid tail of R4C, and further provide negative charge distribution within the tail tube. A ratchet mechanism assists in DNA transmission, which is initiated by an absorption device that structurally resembles the phage-like particle, RcGTA. Overall, these results provide in-depth knowledge into the intact structure and underlining DNA delivery mechanism for the ecologically important siphophages.
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spelling pubmed-102768612023-06-19 Structure and proposed DNA delivery mechanism of a marine roseophage Huang, Yang Sun, Hui Wei, Shuzhen Cai, Lanlan Liu, Liqin Jiang, Yanan Xin, Jiabao Chen, Zhenqin Que, Yuqiong Kong, Zhibo Li, Tingting Yu, Hai Zhang, Jun Gu, Ying Zheng, Qingbing Li, Shaowei Zhang, Rui Xia, Ningshao Nat Commun Article Tailed bacteriophages (order, Caudovirales) account for the majority of all phages. However, the long flexible tail of siphophages hinders comprehensive investigation of the mechanism of viral gene delivery. Here, we report the atomic capsid and in-situ structures of the tail machine of the marine siphophage, vB_DshS-R4C (R4C), which infects Roseobacter. The R4C virion, comprising 12 distinct structural protein components, has a unique five-fold vertex of the icosahedral capsid that allows genome delivery. The specific position and interaction pattern of the tail tube proteins determine the atypical long rigid tail of R4C, and further provide negative charge distribution within the tail tube. A ratchet mechanism assists in DNA transmission, which is initiated by an absorption device that structurally resembles the phage-like particle, RcGTA. Overall, these results provide in-depth knowledge into the intact structure and underlining DNA delivery mechanism for the ecologically important siphophages. Nature Publishing Group UK 2023-06-17 /pmc/articles/PMC10276861/ /pubmed/37330604 http://dx.doi.org/10.1038/s41467-023-39220-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Huang, Yang
Sun, Hui
Wei, Shuzhen
Cai, Lanlan
Liu, Liqin
Jiang, Yanan
Xin, Jiabao
Chen, Zhenqin
Que, Yuqiong
Kong, Zhibo
Li, Tingting
Yu, Hai
Zhang, Jun
Gu, Ying
Zheng, Qingbing
Li, Shaowei
Zhang, Rui
Xia, Ningshao
Structure and proposed DNA delivery mechanism of a marine roseophage
title Structure and proposed DNA delivery mechanism of a marine roseophage
title_full Structure and proposed DNA delivery mechanism of a marine roseophage
title_fullStr Structure and proposed DNA delivery mechanism of a marine roseophage
title_full_unstemmed Structure and proposed DNA delivery mechanism of a marine roseophage
title_short Structure and proposed DNA delivery mechanism of a marine roseophage
title_sort structure and proposed dna delivery mechanism of a marine roseophage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10276861/
https://www.ncbi.nlm.nih.gov/pubmed/37330604
http://dx.doi.org/10.1038/s41467-023-39220-y
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