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Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate

[Image: see text] Novel enzymatic methods are poised to become the dominant processes for de novo synthesis of DNA, promising functional, economic, and environmental advantages over the longstanding approach of phosphoramidite synthesis. Before this can occur, however, enzymatic synthesis methods mu...

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Autores principales: Smith, Jake A., Nguyen, Bichlien H., Carlson, Rob, Bertram, Jeffrey G., Palluk, Sebastian, Arlow, Daniel H., Strauss, Karin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10278165/
https://www.ncbi.nlm.nih.gov/pubmed/37192389
http://dx.doi.org/10.1021/acssynbio.3c00044
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author Smith, Jake A.
Nguyen, Bichlien H.
Carlson, Rob
Bertram, Jeffrey G.
Palluk, Sebastian
Arlow, Daniel H.
Strauss, Karin
author_facet Smith, Jake A.
Nguyen, Bichlien H.
Carlson, Rob
Bertram, Jeffrey G.
Palluk, Sebastian
Arlow, Daniel H.
Strauss, Karin
author_sort Smith, Jake A.
collection PubMed
description [Image: see text] Novel enzymatic methods are poised to become the dominant processes for de novo synthesis of DNA, promising functional, economic, and environmental advantages over the longstanding approach of phosphoramidite synthesis. Before this can occur, however, enzymatic synthesis methods must be parallelized to enable production of multiple DNA sequences simultaneously. As a means to this parallelization, we report a polymerase-nucleotide conjugate that is cleaved using electrochemical oxidation on a microelectrode array. The developed conjugate maintains polymerase activity toward surface-bound substrates with single-base control and detaches from the surface at mild oxidative voltages, leaving an extendable oligonucleotide behind. Our approach readies the way for enzymatic DNA synthesis on the scale necessary for DNA-intensive applications such as DNA data storage or gene synthesis.
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spelling pubmed-102781652023-06-20 Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate Smith, Jake A. Nguyen, Bichlien H. Carlson, Rob Bertram, Jeffrey G. Palluk, Sebastian Arlow, Daniel H. Strauss, Karin ACS Synth Biol [Image: see text] Novel enzymatic methods are poised to become the dominant processes for de novo synthesis of DNA, promising functional, economic, and environmental advantages over the longstanding approach of phosphoramidite synthesis. Before this can occur, however, enzymatic synthesis methods must be parallelized to enable production of multiple DNA sequences simultaneously. As a means to this parallelization, we report a polymerase-nucleotide conjugate that is cleaved using electrochemical oxidation on a microelectrode array. The developed conjugate maintains polymerase activity toward surface-bound substrates with single-base control and detaches from the surface at mild oxidative voltages, leaving an extendable oligonucleotide behind. Our approach readies the way for enzymatic DNA synthesis on the scale necessary for DNA-intensive applications such as DNA data storage or gene synthesis. American Chemical Society 2023-05-16 /pmc/articles/PMC10278165/ /pubmed/37192389 http://dx.doi.org/10.1021/acssynbio.3c00044 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Smith, Jake A.
Nguyen, Bichlien H.
Carlson, Rob
Bertram, Jeffrey G.
Palluk, Sebastian
Arlow, Daniel H.
Strauss, Karin
Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title_full Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title_fullStr Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title_full_unstemmed Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title_short Spatially Selective Electrochemical Cleavage of a Polymerase-Nucleotide Conjugate
title_sort spatially selective electrochemical cleavage of a polymerase-nucleotide conjugate
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10278165/
https://www.ncbi.nlm.nih.gov/pubmed/37192389
http://dx.doi.org/10.1021/acssynbio.3c00044
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