Cargando…
Overview of ICARUS—A Curated, Open Access, Online Repository for Atmospheric Simulation Chamber Data
[Image: see text] Atmospheric simulation chambers continue to be indispensable tools for research in the atmospheric sciences. Insights from chamber studies are integrated into atmospheric chemical transport models, which are used for science-informed policy decisions. However, a centralized data ma...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10278178/ https://www.ncbi.nlm.nih.gov/pubmed/37342759 http://dx.doi.org/10.1021/acsearthspacechem.3c00043 |
_version_ | 1785060428503580672 |
---|---|
author | Nguyen, Tran B. Bates, Kelvin H. Buenconsejo, Reina S. Charan, Sophia M. Cavanna, Eric E. Cocker, David R. Day, Douglas A. DeVault, Marla P. Donahue, Neil M. Finewax, Zachary Habib, Luke F. Handschy, Anne V. Hildebrandt Ruiz, Lea Hou, Chung-Yi S. Jimenez, Jose L. Joo, Taekyu Klodt, Alexandra L. Kong, Weimeng Le, Chen Masoud, Catherine G. Mayernik, Matthew S. Ng, Nga L. Nienhouse, Eric J. Nizkorodov, Sergey A. Orlando, John J. Post, Jeroen J. Sturm, Patrick O. Thrasher, Bridget L. Tyndall, Geoffrey S. Seinfeld, John H. Worley, Steven J. Zhang, Xuan Ziemann, Paul J. |
author_facet | Nguyen, Tran B. Bates, Kelvin H. Buenconsejo, Reina S. Charan, Sophia M. Cavanna, Eric E. Cocker, David R. Day, Douglas A. DeVault, Marla P. Donahue, Neil M. Finewax, Zachary Habib, Luke F. Handschy, Anne V. Hildebrandt Ruiz, Lea Hou, Chung-Yi S. Jimenez, Jose L. Joo, Taekyu Klodt, Alexandra L. Kong, Weimeng Le, Chen Masoud, Catherine G. Mayernik, Matthew S. Ng, Nga L. Nienhouse, Eric J. Nizkorodov, Sergey A. Orlando, John J. Post, Jeroen J. Sturm, Patrick O. Thrasher, Bridget L. Tyndall, Geoffrey S. Seinfeld, John H. Worley, Steven J. Zhang, Xuan Ziemann, Paul J. |
author_sort | Nguyen, Tran B. |
collection | PubMed |
description | [Image: see text] Atmospheric simulation chambers continue to be indispensable tools for research in the atmospheric sciences. Insights from chamber studies are integrated into atmospheric chemical transport models, which are used for science-informed policy decisions. However, a centralized data management and access infrastructure for their scientific products had not been available in the United States and many parts of the world. ICARUS (Integrated Chamber Atmospheric data Repository for Unified Science) is an open access, searchable, web-based infrastructure for storing, sharing, discovering, and utilizing atmospheric chamber data [https://icarus.ucdavis.edu]. ICARUS has two parts: a data intake portal and a search and discovery portal. Data in ICARUS are curated, uniform, interactive, indexed on popular search engines, mirrored by other repositories, version-tracked, vocabulary-controlled, and citable. ICARUS hosts both legacy data and new data in compliance with open access data mandates. Targeted data discovery is available based on key experimental parameters, including organic reactants and mixtures that are managed using the PubChem chemical database, oxidant information, nitrogen oxide (NOx) content, alkylperoxy radical (RO(2)) fate, seed particle information, environmental conditions, and reaction categories. A discipline-specific repository such as ICARUS with high amounts of metadata works to support the evaluation and revision of atmospheric model mechanisms, intercomparison of data and models, and the development of new model frameworks that can have more predictive power in the current and future atmosphere. The open accessibility and interactive nature of ICARUS data may also be useful for teaching, data mining, and training machine learning models. |
format | Online Article Text |
id | pubmed-10278178 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-102781782023-06-20 Overview of ICARUS—A Curated, Open Access, Online Repository for Atmospheric Simulation Chamber Data Nguyen, Tran B. Bates, Kelvin H. Buenconsejo, Reina S. Charan, Sophia M. Cavanna, Eric E. Cocker, David R. Day, Douglas A. DeVault, Marla P. Donahue, Neil M. Finewax, Zachary Habib, Luke F. Handschy, Anne V. Hildebrandt Ruiz, Lea Hou, Chung-Yi S. Jimenez, Jose L. Joo, Taekyu Klodt, Alexandra L. Kong, Weimeng Le, Chen Masoud, Catherine G. Mayernik, Matthew S. Ng, Nga L. Nienhouse, Eric J. Nizkorodov, Sergey A. Orlando, John J. Post, Jeroen J. Sturm, Patrick O. Thrasher, Bridget L. Tyndall, Geoffrey S. Seinfeld, John H. Worley, Steven J. Zhang, Xuan Ziemann, Paul J. ACS Earth Space Chem [Image: see text] Atmospheric simulation chambers continue to be indispensable tools for research in the atmospheric sciences. Insights from chamber studies are integrated into atmospheric chemical transport models, which are used for science-informed policy decisions. However, a centralized data management and access infrastructure for their scientific products had not been available in the United States and many parts of the world. ICARUS (Integrated Chamber Atmospheric data Repository for Unified Science) is an open access, searchable, web-based infrastructure for storing, sharing, discovering, and utilizing atmospheric chamber data [https://icarus.ucdavis.edu]. ICARUS has two parts: a data intake portal and a search and discovery portal. Data in ICARUS are curated, uniform, interactive, indexed on popular search engines, mirrored by other repositories, version-tracked, vocabulary-controlled, and citable. ICARUS hosts both legacy data and new data in compliance with open access data mandates. Targeted data discovery is available based on key experimental parameters, including organic reactants and mixtures that are managed using the PubChem chemical database, oxidant information, nitrogen oxide (NOx) content, alkylperoxy radical (RO(2)) fate, seed particle information, environmental conditions, and reaction categories. A discipline-specific repository such as ICARUS with high amounts of metadata works to support the evaluation and revision of atmospheric model mechanisms, intercomparison of data and models, and the development of new model frameworks that can have more predictive power in the current and future atmosphere. The open accessibility and interactive nature of ICARUS data may also be useful for teaching, data mining, and training machine learning models. American Chemical Society 2023-05-16 /pmc/articles/PMC10278178/ /pubmed/37342759 http://dx.doi.org/10.1021/acsearthspacechem.3c00043 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Nguyen, Tran B. Bates, Kelvin H. Buenconsejo, Reina S. Charan, Sophia M. Cavanna, Eric E. Cocker, David R. Day, Douglas A. DeVault, Marla P. Donahue, Neil M. Finewax, Zachary Habib, Luke F. Handschy, Anne V. Hildebrandt Ruiz, Lea Hou, Chung-Yi S. Jimenez, Jose L. Joo, Taekyu Klodt, Alexandra L. Kong, Weimeng Le, Chen Masoud, Catherine G. Mayernik, Matthew S. Ng, Nga L. Nienhouse, Eric J. Nizkorodov, Sergey A. Orlando, John J. Post, Jeroen J. Sturm, Patrick O. Thrasher, Bridget L. Tyndall, Geoffrey S. Seinfeld, John H. Worley, Steven J. Zhang, Xuan Ziemann, Paul J. Overview of ICARUS—A Curated, Open Access, Online Repository for Atmospheric Simulation Chamber Data |
title | Overview of ICARUS—A Curated, Open Access,
Online Repository for Atmospheric Simulation Chamber Data |
title_full | Overview of ICARUS—A Curated, Open Access,
Online Repository for Atmospheric Simulation Chamber Data |
title_fullStr | Overview of ICARUS—A Curated, Open Access,
Online Repository for Atmospheric Simulation Chamber Data |
title_full_unstemmed | Overview of ICARUS—A Curated, Open Access,
Online Repository for Atmospheric Simulation Chamber Data |
title_short | Overview of ICARUS—A Curated, Open Access,
Online Repository for Atmospheric Simulation Chamber Data |
title_sort | overview of icarus—a curated, open access,
online repository for atmospheric simulation chamber data |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10278178/ https://www.ncbi.nlm.nih.gov/pubmed/37342759 http://dx.doi.org/10.1021/acsearthspacechem.3c00043 |
work_keys_str_mv | AT nguyentranb overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT bateskelvinh overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT buenconsejoreinas overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT charansophiam overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT cavannaerice overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT cockerdavidr overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT daydouglasa overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT devaultmarlap overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT donahueneilm overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT finewaxzachary overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT habiblukef overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT handschyannev overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT hildebrandtruizlea overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT houchungyis overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT jimenezjosel overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT jootaekyu overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT klodtalexandral overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT kongweimeng overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT lechen overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT masoudcatherineg overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT mayernikmatthews overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT ngngal overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT nienhouseericj overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT nizkorodovsergeya overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT orlandojohnj overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT postjeroenj overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT sturmpatricko overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT thrasherbridgetl overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT tyndallgeoffreys overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT seinfeldjohnh overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT worleystevenj overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT zhangxuan overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata AT ziemannpaulj overviewoficarusacuratedopenaccessonlinerepositoryforatmosphericsimulationchamberdata |