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Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms
We performed deep metagenomic sequencing on hydrocarbon-degrading marine microcosms designed to experimentally determine the effect of photo-oxidation on oil biodegradation dynamics. Assembly, binning, and dereplication yielded 73 unique metagenome-assembled genomes (MAGs) from 6 phyla, of which 61...
| Autores principales: | , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
American Society for Microbiology
2023
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281115/ https://www.ncbi.nlm.nih.gov/pubmed/37162353 http://dx.doi.org/10.1128/mra.00210-23 |
| _version_ | 1785060943175090176 |
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| author | Barnes, Shelby J. Althouse, Raven C. Costa, Bianca F. Hu, Boyan Kovalev, Maxim Kulik, Timur Lee, Yu-Tung Moore, Meredith C. Peng, Emily Pook, Jing Yao Sharma, Akshita Wood, Celia Webb, Eric A. Sterling, Hannah Aeppli, Christoph Thrash, J. Cameron |
| author_facet | Barnes, Shelby J. Althouse, Raven C. Costa, Bianca F. Hu, Boyan Kovalev, Maxim Kulik, Timur Lee, Yu-Tung Moore, Meredith C. Peng, Emily Pook, Jing Yao Sharma, Akshita Wood, Celia Webb, Eric A. Sterling, Hannah Aeppli, Christoph Thrash, J. Cameron |
| author_sort | Barnes, Shelby J. |
| collection | PubMed |
| description | We performed deep metagenomic sequencing on hydrocarbon-degrading marine microcosms designed to experimentally determine the effect of photo-oxidation on oil biodegradation dynamics. Assembly, binning, and dereplication yielded 73 unique metagenome-assembled genomes (MAGs) from 6 phyla, of which 61 are predicted to be over 90% complete. |
| format | Online Article Text |
| id | pubmed-10281115 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2023 |
| publisher | American Society for Microbiology |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-102811152023-06-21 Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms Barnes, Shelby J. Althouse, Raven C. Costa, Bianca F. Hu, Boyan Kovalev, Maxim Kulik, Timur Lee, Yu-Tung Moore, Meredith C. Peng, Emily Pook, Jing Yao Sharma, Akshita Wood, Celia Webb, Eric A. Sterling, Hannah Aeppli, Christoph Thrash, J. Cameron Microbiol Resour Announc Genome Sequences We performed deep metagenomic sequencing on hydrocarbon-degrading marine microcosms designed to experimentally determine the effect of photo-oxidation on oil biodegradation dynamics. Assembly, binning, and dereplication yielded 73 unique metagenome-assembled genomes (MAGs) from 6 phyla, of which 61 are predicted to be over 90% complete. American Society for Microbiology 2023-05-10 /pmc/articles/PMC10281115/ /pubmed/37162353 http://dx.doi.org/10.1128/mra.00210-23 Text en Copyright © 2023 Barnes et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
| spellingShingle | Genome Sequences Barnes, Shelby J. Althouse, Raven C. Costa, Bianca F. Hu, Boyan Kovalev, Maxim Kulik, Timur Lee, Yu-Tung Moore, Meredith C. Peng, Emily Pook, Jing Yao Sharma, Akshita Wood, Celia Webb, Eric A. Sterling, Hannah Aeppli, Christoph Thrash, J. Cameron Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title | Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title_full | Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title_fullStr | Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title_full_unstemmed | Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title_short | Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms |
| title_sort | metagenome-assembled genomes from photo-oxidized and nonoxidized oil-degrading marine microcosms |
| topic | Genome Sequences |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281115/ https://www.ncbi.nlm.nih.gov/pubmed/37162353 http://dx.doi.org/10.1128/mra.00210-23 |
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