Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing

We report a preliminary survey of the endophytic bacterial microbiota of seed from wild carrot (Daucus carota) using 16S rRNA gene amplicon sequencing. Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria were the most abundant phyla detected, while Bacillus, Massilia, Paenibacillus, Pantoe...

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Autores principales: Kumar, Sandeep, Johnson, Linda J., Teasdale, Suliana, Morozova, Yulia, de Bonth, Anouck C. M., Jauregui, Ruy, Hannaford, Rina, Card, Stuart D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Amplicon Sequence Collections
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281129/
https://www.ncbi.nlm.nih.gov/pubmed/37154770
http://dx.doi.org/10.1128/mra.00140-23
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author Kumar, Sandeep
Johnson, Linda J.
Teasdale, Suliana
Morozova, Yulia
de Bonth, Anouck C. M.
Jauregui, Ruy
Hannaford, Rina
Card, Stuart D.
author_facet Kumar, Sandeep
Johnson, Linda J.
Teasdale, Suliana
Morozova, Yulia
de Bonth, Anouck C. M.
Jauregui, Ruy
Hannaford, Rina
Card, Stuart D.
author_sort Kumar, Sandeep
collection PubMed
description We report a preliminary survey of the endophytic bacterial microbiota of seed from wild carrot (Daucus carota) using 16S rRNA gene amplicon sequencing. Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria were the most abundant phyla detected, while Bacillus, Massilia, Paenibacillus, Pantoea, Pseudomonas, Rhizobium, Sphingomonas, and Xanthomonas were the most abundant genera.
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spelling pubmed-102811292023-06-21 Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing Kumar, Sandeep Johnson, Linda J. Teasdale, Suliana Morozova, Yulia de Bonth, Anouck C. M. Jauregui, Ruy Hannaford, Rina Card, Stuart D. Microbiol Resour Announc Amplicon Sequence Collections We report a preliminary survey of the endophytic bacterial microbiota of seed from wild carrot (Daucus carota) using 16S rRNA gene amplicon sequencing. Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria were the most abundant phyla detected, while Bacillus, Massilia, Paenibacillus, Pantoea, Pseudomonas, Rhizobium, Sphingomonas, and Xanthomonas were the most abundant genera. American Society for Microbiology 2023-05-08 /pmc/articles/PMC10281129/ /pubmed/37154770 http://dx.doi.org/10.1128/mra.00140-23 Text en Copyright © 2023 Kumar et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Amplicon Sequence Collections
Kumar, Sandeep
Johnson, Linda J.
Teasdale, Suliana
Morozova, Yulia
de Bonth, Anouck C. M.
Jauregui, Ruy
Hannaford, Rina
Card, Stuart D.
Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title_full Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title_fullStr Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title_full_unstemmed Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title_short Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing
title_sort survey of the endophytic bacteria inhabiting wild daucus seed using 16s rrna gene amplicon sequencing
topic Amplicon Sequence Collections
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281129/
https://www.ncbi.nlm.nih.gov/pubmed/37154770
http://dx.doi.org/10.1128/mra.00140-23
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