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Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network

Rapid and successful clinical diagnosis and bacterial infection treatment depend on accurate identification and differentiation between different pathogenic bacterial species. A lot of efforts have been made to utilize modern techniques which avoid the laborious work and time-consuming of convention...

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Autores principales: Arabi, Dina, Hamdy, Omnia, Mohamed, Mahmoud S. M., Abdel-Salam, Zienab, Abdel-Harith, Mohamed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281934/
https://www.ncbi.nlm.nih.gov/pubmed/37338621
http://dx.doi.org/10.1186/s13568-023-01569-0
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author Arabi, Dina
Hamdy, Omnia
Mohamed, Mahmoud S. M.
Abdel-Salam, Zienab
Abdel-Harith, Mohamed
author_facet Arabi, Dina
Hamdy, Omnia
Mohamed, Mahmoud S. M.
Abdel-Salam, Zienab
Abdel-Harith, Mohamed
author_sort Arabi, Dina
collection PubMed
description Rapid and successful clinical diagnosis and bacterial infection treatment depend on accurate identification and differentiation between different pathogenic bacterial species. A lot of efforts have been made to utilize modern techniques which avoid the laborious work and time-consuming of conventional methods to fulfill this task. Among such techniques, laser-induced breakdown spectroscopy (LIBS) can tell much about bacterial identity and functionality. In the present study, a sensitivity-improved version of LIBS, i.e. nano-enhanced LIBS (NELIBS), has been used to discriminate between two different bacteria (Pseudomonas aeruginosa and Proteus mirabilis) belonging to different taxonomic orders. Biogenic silver nanoparticles (AgNPs) are sprinkled onto the samples’ surface to have better discrimination capability of the technique. The obtained spectroscopic results of the NELIBS approach revealed superior differentiation between the two bacterial species compared to the results of the conventional LIBS. Identification of each bacterial species has been achieved in light of the presence of spectral lines of certain elements. On the other hand, the discrimination was successful by comparing the intensity of the spectral lines in the spectra of the two bacteria. In addition, an artificial neural network (ANN) model has been created to assess the variation between the two data sets, affecting the differentiation process. The results revealed that NELIBS provides higher sensitivity and more intense spectral lines with increased detectable elements. The ANN results showed that the accuracy rates are 88% and 92% for LIBS and NELIBS, respectively. In the present work, it has been demonstrated that NELIBS combined with ANN successfully differentiated between both bacteria rapidly with high precision compared to conventional microbiological discrimination techniques and with minimum sample preparation. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13568-023-01569-0.
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spelling pubmed-102819342023-06-22 Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network Arabi, Dina Hamdy, Omnia Mohamed, Mahmoud S. M. Abdel-Salam, Zienab Abdel-Harith, Mohamed AMB Express Original Article Rapid and successful clinical diagnosis and bacterial infection treatment depend on accurate identification and differentiation between different pathogenic bacterial species. A lot of efforts have been made to utilize modern techniques which avoid the laborious work and time-consuming of conventional methods to fulfill this task. Among such techniques, laser-induced breakdown spectroscopy (LIBS) can tell much about bacterial identity and functionality. In the present study, a sensitivity-improved version of LIBS, i.e. nano-enhanced LIBS (NELIBS), has been used to discriminate between two different bacteria (Pseudomonas aeruginosa and Proteus mirabilis) belonging to different taxonomic orders. Biogenic silver nanoparticles (AgNPs) are sprinkled onto the samples’ surface to have better discrimination capability of the technique. The obtained spectroscopic results of the NELIBS approach revealed superior differentiation between the two bacterial species compared to the results of the conventional LIBS. Identification of each bacterial species has been achieved in light of the presence of spectral lines of certain elements. On the other hand, the discrimination was successful by comparing the intensity of the spectral lines in the spectra of the two bacteria. In addition, an artificial neural network (ANN) model has been created to assess the variation between the two data sets, affecting the differentiation process. The results revealed that NELIBS provides higher sensitivity and more intense spectral lines with increased detectable elements. The ANN results showed that the accuracy rates are 88% and 92% for LIBS and NELIBS, respectively. In the present work, it has been demonstrated that NELIBS combined with ANN successfully differentiated between both bacteria rapidly with high precision compared to conventional microbiological discrimination techniques and with minimum sample preparation. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13568-023-01569-0. Springer Berlin Heidelberg 2023-06-20 /pmc/articles/PMC10281934/ /pubmed/37338621 http://dx.doi.org/10.1186/s13568-023-01569-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Arabi, Dina
Hamdy, Omnia
Mohamed, Mahmoud S. M.
Abdel-Salam, Zienab
Abdel-Harith, Mohamed
Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title_full Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title_fullStr Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title_full_unstemmed Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title_short Discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
title_sort discriminating two bacteria via laser-induced breakdown spectroscopy and artificial neural network
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281934/
https://www.ncbi.nlm.nih.gov/pubmed/37338621
http://dx.doi.org/10.1186/s13568-023-01569-0
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