Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023

In late 2022 and early 2023, SARS-CoV-2 infections were detected on three mink farms in Poland situated within a few km from each other. Whole-genome sequencing of the viruses on two of the farms showed that they were related to a virus identified in humans in the same region 2 years before (B.1.1.3...

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Autores principales: Domańska-Blicharz, Katarzyna, Oude Munnink, Bas B, Orłowska, Anna, Smreczak, Marcin, Opolska, Justyna, Lisowska, Anna, Trębas, Paweł, Socha, Wojciech, Giza, Aleksandra, Bomba, Arkadiusz, Iwan, Ewelina, Rola, Jerzy, Koopmans, Marion
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Centre for Disease Prevention and Control (ECDC) 2023
Materias:
Rapid Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10283451/
https://www.ncbi.nlm.nih.gov/pubmed/37078885
http://dx.doi.org/10.2807/1560-7917.ES.2023.28.16.2300188
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author Domańska-Blicharz, Katarzyna
Oude Munnink, Bas B
Orłowska, Anna
Smreczak, Marcin
Opolska, Justyna
Lisowska, Anna
Trębas, Paweł
Socha, Wojciech
Giza, Aleksandra
Bomba, Arkadiusz
Iwan, Ewelina
Rola, Jerzy
Koopmans, Marion
author_facet Domańska-Blicharz, Katarzyna
Oude Munnink, Bas B
Orłowska, Anna
Smreczak, Marcin
Opolska, Justyna
Lisowska, Anna
Trębas, Paweł
Socha, Wojciech
Giza, Aleksandra
Bomba, Arkadiusz
Iwan, Ewelina
Rola, Jerzy
Koopmans, Marion
author_sort Domańska-Blicharz, Katarzyna
collection PubMed
description In late 2022 and early 2023, SARS-CoV-2 infections were detected on three mink farms in Poland situated within a few km from each other. Whole-genome sequencing of the viruses on two of the farms showed that they were related to a virus identified in humans in the same region 2 years before (B.1.1.307 lineage). Many mutations were found, including in the S protein typical of adaptations to the mink host. The origin of the virus remains to be determined.
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spelling pubmed-102834512023-06-22 Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023 Domańska-Blicharz, Katarzyna Oude Munnink, Bas B Orłowska, Anna Smreczak, Marcin Opolska, Justyna Lisowska, Anna Trębas, Paweł Socha, Wojciech Giza, Aleksandra Bomba, Arkadiusz Iwan, Ewelina Rola, Jerzy Koopmans, Marion Euro Surveill Rapid Communication In late 2022 and early 2023, SARS-CoV-2 infections were detected on three mink farms in Poland situated within a few km from each other. Whole-genome sequencing of the viruses on two of the farms showed that they were related to a virus identified in humans in the same region 2 years before (B.1.1.307 lineage). Many mutations were found, including in the S protein typical of adaptations to the mink host. The origin of the virus remains to be determined. European Centre for Disease Prevention and Control (ECDC) 2023-04-20 /pmc/articles/PMC10283451/ /pubmed/37078885 http://dx.doi.org/10.2807/1560-7917.ES.2023.28.16.2300188 Text en This article is copyright of the authors or their affiliated institutions, 2023. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made.
spellingShingle Rapid Communication
Domańska-Blicharz, Katarzyna
Oude Munnink, Bas B
Orłowska, Anna
Smreczak, Marcin
Opolska, Justyna
Lisowska, Anna
Trębas, Paweł
Socha, Wojciech
Giza, Aleksandra
Bomba, Arkadiusz
Iwan, Ewelina
Rola, Jerzy
Koopmans, Marion
Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title_full Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title_fullStr Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title_full_unstemmed Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title_short Cryptic SARS-CoV-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, Poland, November 2022 to January 2023
title_sort cryptic sars-cov-2 lineage identified on two mink farms as a possible result of long-term undetected circulation in an unknown animal reservoir, poland, november 2022 to january 2023
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10283451/
https://www.ncbi.nlm.nih.gov/pubmed/37078885
http://dx.doi.org/10.2807/1560-7917.ES.2023.28.16.2300188
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