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Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition
The present study demonstrates the importance of converting signal intensity maps of organic tissues collected by laser-induced breakdown spectroscopy (LIBS) to elemental concentration maps and also proposes a methodology based on machine learning for its execution. The proposed methodology employs...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10284993/ https://www.ncbi.nlm.nih.gov/pubmed/37344545 http://dx.doi.org/10.1038/s41598-023-37258-y |
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author | Janovszky, Patrick Kéri, Albert Palásti, Dávid J. Brunnbauer, Lukas Domoki, Ferenc Limbeck, Andreas Galbács, Gábor |
author_facet | Janovszky, Patrick Kéri, Albert Palásti, Dávid J. Brunnbauer, Lukas Domoki, Ferenc Limbeck, Andreas Galbács, Gábor |
author_sort | Janovszky, Patrick |
collection | PubMed |
description | The present study demonstrates the importance of converting signal intensity maps of organic tissues collected by laser-induced breakdown spectroscopy (LIBS) to elemental concentration maps and also proposes a methodology based on machine learning for its execution. The proposed methodology employs matrix-matched external calibration supported by a pixel-by-pixel automatic matrix (tissue type) recognition performed by linear discriminant analysis of the spatially resolved LIBS hyperspectral data set. On a swine (porcine) brain sample, we successfully performed this matrix recognition with an accuracy of 98% for the grey and white matter and we converted a LIBS intensity map of a tissue sample to a correct concentration map for the elements Na, K and Mg. Found concentrations in the grey and white matter agreed the element concentrations published in the literature and our reference measurements. Our results revealed that the actual concentration distribution in tissues can be quite different from what is suggested by the LIBS signal intensity map, therefore this conversion is always suggested to be performed if an accurate concentration distribution is to be assessed. |
format | Online Article Text |
id | pubmed-10284993 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102849932023-06-23 Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition Janovszky, Patrick Kéri, Albert Palásti, Dávid J. Brunnbauer, Lukas Domoki, Ferenc Limbeck, Andreas Galbács, Gábor Sci Rep Article The present study demonstrates the importance of converting signal intensity maps of organic tissues collected by laser-induced breakdown spectroscopy (LIBS) to elemental concentration maps and also proposes a methodology based on machine learning for its execution. The proposed methodology employs matrix-matched external calibration supported by a pixel-by-pixel automatic matrix (tissue type) recognition performed by linear discriminant analysis of the spatially resolved LIBS hyperspectral data set. On a swine (porcine) brain sample, we successfully performed this matrix recognition with an accuracy of 98% for the grey and white matter and we converted a LIBS intensity map of a tissue sample to a correct concentration map for the elements Na, K and Mg. Found concentrations in the grey and white matter agreed the element concentrations published in the literature and our reference measurements. Our results revealed that the actual concentration distribution in tissues can be quite different from what is suggested by the LIBS signal intensity map, therefore this conversion is always suggested to be performed if an accurate concentration distribution is to be assessed. Nature Publishing Group UK 2023-06-21 /pmc/articles/PMC10284993/ /pubmed/37344545 http://dx.doi.org/10.1038/s41598-023-37258-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Janovszky, Patrick Kéri, Albert Palásti, Dávid J. Brunnbauer, Lukas Domoki, Ferenc Limbeck, Andreas Galbács, Gábor Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title | Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title_full | Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title_fullStr | Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title_full_unstemmed | Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title_short | Quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
title_sort | quantitative elemental mapping of biological tissues by laser-induced breakdown spectroscopy using matrix recognition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10284993/ https://www.ncbi.nlm.nih.gov/pubmed/37344545 http://dx.doi.org/10.1038/s41598-023-37258-y |
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