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White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux

Soil organic matter (SOM) decomposition mechanisms in rainforest ecosystems are governed by biotic and abiotic procedures which depend on available oxygen in the soil. White-rot fungi (WRF) play an important role in the primary decomposition of SOM via enzymatic mechanisms (biotic mechanism), which...

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Autores principales: Jofré-Fernández, Ignacio, Matus-Baeza, Francisco, Merino-Guzmán, Carolina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10285405/
https://www.ncbi.nlm.nih.gov/pubmed/37362943
http://dx.doi.org/10.3389/fmicb.2023.1148750
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author Jofré-Fernández, Ignacio
Matus-Baeza, Francisco
Merino-Guzmán, Carolina
author_facet Jofré-Fernández, Ignacio
Matus-Baeza, Francisco
Merino-Guzmán, Carolina
author_sort Jofré-Fernández, Ignacio
collection PubMed
description Soil organic matter (SOM) decomposition mechanisms in rainforest ecosystems are governed by biotic and abiotic procedures which depend on available oxygen in the soil. White-rot fungi (WRF) play an important role in the primary decomposition of SOM via enzymatic mechanisms (biotic mechanism), which are linked to abiotic oxidative reactions (e.g., Fenton reaction), where both processes are dependent on reactive oxygen species (ROS) and soil pH variation, which has yet been studied. In humid temperate forest soils, we hypothesize that soil pH is a determining factor that regulates the production and consumption of ROS during biotic and abiotic SOM decomposition. Three soils from different parent materials and WRF inoculum were considered for this study: granitic (Nahuelbuta, Schizophyllum commune), metamorphic (Alerce Costero, Stereum hirsutum), and volcanic-allophanic (Puyehue, Galerina patagonica). CO(2) fluxes, lignin peroxidase, manganese peroxidase, and dye-decolorizing peroxidase levels were all determined. Likewise, the production of superoxide anion (O(2)•-), hydrogen peroxide (H(2)O(2)), and hydroxyl radicals (•OH) were assessed in soils microcosms after 36 days of anaerobic incubation with WRF inoculum and induced Fenton reaction under pH variations ranging from 2.5 to 5.1. ROS significantly increased biotic and abiotic CO(2) emissions in all tested soils, according to the findings. The highest values (217.45 mg C kg(−1)) were found during the anaerobic incubation of sterilized and inoculated soils with WRF at a natural pH of 4.5. At pH 4.0, the lowest levels of C mineralization (82 mg C kg(−1)) were found in Nahuelbuta soil. Enzyme activities showed different trends as pH changed. The Fenton reaction consumed more H(2)O(2) between pH 3 and 4, but less between pH 4.5 and 2.5. The mechanisms that oxidized SOM are extremely sensitive to variations in soil pH and the stability of oxidant radical and non-radical compounds, according to our findings.
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spelling pubmed-102854052023-06-23 White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux Jofré-Fernández, Ignacio Matus-Baeza, Francisco Merino-Guzmán, Carolina Front Microbiol Microbiology Soil organic matter (SOM) decomposition mechanisms in rainforest ecosystems are governed by biotic and abiotic procedures which depend on available oxygen in the soil. White-rot fungi (WRF) play an important role in the primary decomposition of SOM via enzymatic mechanisms (biotic mechanism), which are linked to abiotic oxidative reactions (e.g., Fenton reaction), where both processes are dependent on reactive oxygen species (ROS) and soil pH variation, which has yet been studied. In humid temperate forest soils, we hypothesize that soil pH is a determining factor that regulates the production and consumption of ROS during biotic and abiotic SOM decomposition. Three soils from different parent materials and WRF inoculum were considered for this study: granitic (Nahuelbuta, Schizophyllum commune), metamorphic (Alerce Costero, Stereum hirsutum), and volcanic-allophanic (Puyehue, Galerina patagonica). CO(2) fluxes, lignin peroxidase, manganese peroxidase, and dye-decolorizing peroxidase levels were all determined. Likewise, the production of superoxide anion (O(2)•-), hydrogen peroxide (H(2)O(2)), and hydroxyl radicals (•OH) were assessed in soils microcosms after 36 days of anaerobic incubation with WRF inoculum and induced Fenton reaction under pH variations ranging from 2.5 to 5.1. ROS significantly increased biotic and abiotic CO(2) emissions in all tested soils, according to the findings. The highest values (217.45 mg C kg(−1)) were found during the anaerobic incubation of sterilized and inoculated soils with WRF at a natural pH of 4.5. At pH 4.0, the lowest levels of C mineralization (82 mg C kg(−1)) were found in Nahuelbuta soil. Enzyme activities showed different trends as pH changed. The Fenton reaction consumed more H(2)O(2) between pH 3 and 4, but less between pH 4.5 and 2.5. The mechanisms that oxidized SOM are extremely sensitive to variations in soil pH and the stability of oxidant radical and non-radical compounds, according to our findings. Frontiers Media S.A. 2023-06-08 /pmc/articles/PMC10285405/ /pubmed/37362943 http://dx.doi.org/10.3389/fmicb.2023.1148750 Text en Copyright © 2023 Jofré-Fernández, Matus-Baeza and Merino-Guzmán. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Jofré-Fernández, Ignacio
Matus-Baeza, Francisco
Merino-Guzmán, Carolina
White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title_full White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title_fullStr White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title_full_unstemmed White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title_short White-rot fungi scavenge reactive oxygen species, which drives pH-dependent exo-enzymatic mechanisms and promotes CO(2) efflux
title_sort white-rot fungi scavenge reactive oxygen species, which drives ph-dependent exo-enzymatic mechanisms and promotes co(2) efflux
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10285405/
https://www.ncbi.nlm.nih.gov/pubmed/37362943
http://dx.doi.org/10.3389/fmicb.2023.1148750
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