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A phylotranscriptomic dataset of angiosperm species under cold stress
Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including cold tolera...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10287676/ https://www.ncbi.nlm.nih.gov/pubmed/37349352 http://dx.doi.org/10.1038/s41597-023-02307-8 |
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author | Wang, Shuo Zhang, Yixian Ye, Xiaoxue Shen, Yirong Liu, Hua Zhao, Xijuan Guo, Liangyu Cao, Lu Du, Yunfei Wu, Wenwu |
author_facet | Wang, Shuo Zhang, Yixian Ye, Xiaoxue Shen, Yirong Liu, Hua Zhao, Xijuan Guo, Liangyu Cao, Lu Du, Yunfei Wu, Wenwu |
author_sort | Wang, Shuo |
collection | PubMed |
description | Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including cold tolerance. Since the development of high-throughput sequencing, transcriptome has been widely utilized to gain insights into the molecular mechanisms of plants in response to cold stress. However, previous studies generally focused on single or two species, and comparative transcriptome analyses for multispecies responding to cold stress were limited. In this study, we selected 11 representative angiosperm species, performed phylotranscriptome experiments at four time points before and after cold stress, and presented a profile of cold-induced transcriptome changes in angiosperms. Our multispecies cold-responsive RNA-seq datasets provide valuable references for exploring conserved and evolutionary mechanisms of angiosperms in adaptation to cold stress. |
format | Online Article Text |
id | pubmed-10287676 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102876762023-06-24 A phylotranscriptomic dataset of angiosperm species under cold stress Wang, Shuo Zhang, Yixian Ye, Xiaoxue Shen, Yirong Liu, Hua Zhao, Xijuan Guo, Liangyu Cao, Lu Du, Yunfei Wu, Wenwu Sci Data Data Descriptor Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including cold tolerance. Since the development of high-throughput sequencing, transcriptome has been widely utilized to gain insights into the molecular mechanisms of plants in response to cold stress. However, previous studies generally focused on single or two species, and comparative transcriptome analyses for multispecies responding to cold stress were limited. In this study, we selected 11 representative angiosperm species, performed phylotranscriptome experiments at four time points before and after cold stress, and presented a profile of cold-induced transcriptome changes in angiosperms. Our multispecies cold-responsive RNA-seq datasets provide valuable references for exploring conserved and evolutionary mechanisms of angiosperms in adaptation to cold stress. Nature Publishing Group UK 2023-06-22 /pmc/articles/PMC10287676/ /pubmed/37349352 http://dx.doi.org/10.1038/s41597-023-02307-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Data Descriptor Wang, Shuo Zhang, Yixian Ye, Xiaoxue Shen, Yirong Liu, Hua Zhao, Xijuan Guo, Liangyu Cao, Lu Du, Yunfei Wu, Wenwu A phylotranscriptomic dataset of angiosperm species under cold stress |
title | A phylotranscriptomic dataset of angiosperm species under cold stress |
title_full | A phylotranscriptomic dataset of angiosperm species under cold stress |
title_fullStr | A phylotranscriptomic dataset of angiosperm species under cold stress |
title_full_unstemmed | A phylotranscriptomic dataset of angiosperm species under cold stress |
title_short | A phylotranscriptomic dataset of angiosperm species under cold stress |
title_sort | phylotranscriptomic dataset of angiosperm species under cold stress |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10287676/ https://www.ncbi.nlm.nih.gov/pubmed/37349352 http://dx.doi.org/10.1038/s41597-023-02307-8 |
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