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Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure

It is believed that wood-rot fungi change their wood decay activities due to influences from co-existing bacterial communities; however, it is difficult to elucidate experimentally the interaction mechanisms in fungal-bacterial consortia because the bacterial community structure is quite unstable an...

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Autores principales: Mori, Toshio, Terashima, Taiki, Matsumura, Masaki, Tsuruta, Koudai, Dohra, Hideo, Kawagishi, Hirokazu, Hirai, Hirofumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10287725/
https://www.ncbi.nlm.nih.gov/pubmed/37349534
http://dx.doi.org/10.1038/s43705-023-00270-4
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author Mori, Toshio
Terashima, Taiki
Matsumura, Masaki
Tsuruta, Koudai
Dohra, Hideo
Kawagishi, Hirokazu
Hirai, Hirofumi
author_facet Mori, Toshio
Terashima, Taiki
Matsumura, Masaki
Tsuruta, Koudai
Dohra, Hideo
Kawagishi, Hirokazu
Hirai, Hirofumi
author_sort Mori, Toshio
collection PubMed
description It is believed that wood-rot fungi change their wood decay activities due to influences from co-existing bacterial communities; however, it is difficult to elucidate experimentally the interaction mechanisms in fungal-bacterial consortia because the bacterial community structure is quite unstable and readily changes. Indeed, the wood decay properties of fungal-bacterial consortia consisting of a white-rot fungus Phanerochaete sordida YK-624 and a natural bacterial community changed dramatically during several sub-cultivations on wood. Therefore, development of a sub-cultivation method that imparts stability to the bacterial community structure and fungal phenotype was attempted. The adopted method using agar medium enabled maintenance of fungal phenotypes relating to wood decay and the bacterial community even through dozens of repetitive sub-cultures. Some bacterial metabolic pathways identified based on gene predictions were screened as candidates involved in P. sordida–bacterial interactions. In particular, pathways related to prenyl naphthoquinone biosynthesis appeared to be involved in an interaction that promotes higher lignin degradation selectivity by the consortia, as naphthoquinone derivatives induced phenol-oxidizing activity. Based on these results, it is expected that detailed analyses of the relationship between the wood-degrading properties of white-rot fungal-bacterial consortia and bacterial community structures will be feasible using the sub-cultivation method developed in this study.
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spelling pubmed-102877252023-06-24 Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure Mori, Toshio Terashima, Taiki Matsumura, Masaki Tsuruta, Koudai Dohra, Hideo Kawagishi, Hirokazu Hirai, Hirofumi ISME Commun Article It is believed that wood-rot fungi change their wood decay activities due to influences from co-existing bacterial communities; however, it is difficult to elucidate experimentally the interaction mechanisms in fungal-bacterial consortia because the bacterial community structure is quite unstable and readily changes. Indeed, the wood decay properties of fungal-bacterial consortia consisting of a white-rot fungus Phanerochaete sordida YK-624 and a natural bacterial community changed dramatically during several sub-cultivations on wood. Therefore, development of a sub-cultivation method that imparts stability to the bacterial community structure and fungal phenotype was attempted. The adopted method using agar medium enabled maintenance of fungal phenotypes relating to wood decay and the bacterial community even through dozens of repetitive sub-cultures. Some bacterial metabolic pathways identified based on gene predictions were screened as candidates involved in P. sordida–bacterial interactions. In particular, pathways related to prenyl naphthoquinone biosynthesis appeared to be involved in an interaction that promotes higher lignin degradation selectivity by the consortia, as naphthoquinone derivatives induced phenol-oxidizing activity. Based on these results, it is expected that detailed analyses of the relationship between the wood-degrading properties of white-rot fungal-bacterial consortia and bacterial community structures will be feasible using the sub-cultivation method developed in this study. Nature Publishing Group UK 2023-06-22 /pmc/articles/PMC10287725/ /pubmed/37349534 http://dx.doi.org/10.1038/s43705-023-00270-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Mori, Toshio
Terashima, Taiki
Matsumura, Masaki
Tsuruta, Koudai
Dohra, Hideo
Kawagishi, Hirokazu
Hirai, Hirofumi
Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title_full Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title_fullStr Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title_full_unstemmed Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title_short Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
title_sort construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10287725/
https://www.ncbi.nlm.nih.gov/pubmed/37349534
http://dx.doi.org/10.1038/s43705-023-00270-4
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