Cargando…

Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys

In Finland, the first wave of the COVID-19 epidemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) took place from March to June 2020, with the majority of COVID-19 cases diagnosed in the Helsinki-Uusimaa region. The magnitude and trend in the incidence of COVID-19 is one...

Descripción completa

Detalles Bibliográficos
Autores principales: Nieminen, Tuomo A., Auranen, Kari, Kulathinal, Sangita, Härkänen, Tommi, Melin, Merit, Palmu, Arto A., Jokinen, Jukka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10289354/
https://www.ncbi.nlm.nih.gov/pubmed/37352274
http://dx.doi.org/10.1371/journal.pone.0282094
_version_ 1785062258531893248
author Nieminen, Tuomo A.
Auranen, Kari
Kulathinal, Sangita
Härkänen, Tommi
Melin, Merit
Palmu, Arto A.
Jokinen, Jukka
author_facet Nieminen, Tuomo A.
Auranen, Kari
Kulathinal, Sangita
Härkänen, Tommi
Melin, Merit
Palmu, Arto A.
Jokinen, Jukka
author_sort Nieminen, Tuomo A.
collection PubMed
description In Finland, the first wave of the COVID-19 epidemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) took place from March to June 2020, with the majority of COVID-19 cases diagnosed in the Helsinki-Uusimaa region. The magnitude and trend in the incidence of COVID-19 is one way to monitor the course of the epidemic. The diagnosed COVID-19 cases are a subset of the infections and therefore the COVID-19 incidence underestimates the SARS-CoV-2 incidence. The likelihood that an individual with SARS-CoV-2 infection is diagnosed with COVID-19 depends on the clinical manifestation as well as the infection testing policy and capacity. These factors may fluctuate over time and the underreporting of infections changes accordingly. Quantifying the extent of underreporting allows the assessment of the true incidence of infection. To obtain information on the incidence of SARS-CoV-2 infection in Finland, a series of serological surveys was initiated in April 2020. We develop a Bayesian inference approach and apply it to data from the serological surveys, registered COVID-19 cases, and external data on antibody development, to estimate the time-dependent underreporting of SARS-Cov-2 infections during the first wave of the COVID-19 epidemic in Finland. During the entire first wave, there were 1 to 5 (95% probability) SARS-CoV-2 infections for every COVID-19 case. The underreporting was highest before April when there were 4 to 17 (95% probability) infections for every COVID-19 case. It is likely that between 0.5%–1.0% (50% probability) and no more than 1.5% (95% probability) of the adult population in the Helsinki-Uusimaa region were infected with SARS-CoV-2 by the beginning of July 2020.
format Online
Article
Text
id pubmed-10289354
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-102893542023-06-24 Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys Nieminen, Tuomo A. Auranen, Kari Kulathinal, Sangita Härkänen, Tommi Melin, Merit Palmu, Arto A. Jokinen, Jukka PLoS One Research Article In Finland, the first wave of the COVID-19 epidemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) took place from March to June 2020, with the majority of COVID-19 cases diagnosed in the Helsinki-Uusimaa region. The magnitude and trend in the incidence of COVID-19 is one way to monitor the course of the epidemic. The diagnosed COVID-19 cases are a subset of the infections and therefore the COVID-19 incidence underestimates the SARS-CoV-2 incidence. The likelihood that an individual with SARS-CoV-2 infection is diagnosed with COVID-19 depends on the clinical manifestation as well as the infection testing policy and capacity. These factors may fluctuate over time and the underreporting of infections changes accordingly. Quantifying the extent of underreporting allows the assessment of the true incidence of infection. To obtain information on the incidence of SARS-CoV-2 infection in Finland, a series of serological surveys was initiated in April 2020. We develop a Bayesian inference approach and apply it to data from the serological surveys, registered COVID-19 cases, and external data on antibody development, to estimate the time-dependent underreporting of SARS-Cov-2 infections during the first wave of the COVID-19 epidemic in Finland. During the entire first wave, there were 1 to 5 (95% probability) SARS-CoV-2 infections for every COVID-19 case. The underreporting was highest before April when there were 4 to 17 (95% probability) infections for every COVID-19 case. It is likely that between 0.5%–1.0% (50% probability) and no more than 1.5% (95% probability) of the adult population in the Helsinki-Uusimaa region were infected with SARS-CoV-2 by the beginning of July 2020. Public Library of Science 2023-06-23 /pmc/articles/PMC10289354/ /pubmed/37352274 http://dx.doi.org/10.1371/journal.pone.0282094 Text en © 2023 Nieminen et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nieminen, Tuomo A.
Auranen, Kari
Kulathinal, Sangita
Härkänen, Tommi
Melin, Merit
Palmu, Arto A.
Jokinen, Jukka
Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title_full Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title_fullStr Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title_full_unstemmed Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title_short Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland—Bayesian inference based on a series of serological surveys
title_sort underreporting of sars-cov-2 infections during the first wave of the 2020 covid-19 epidemic in finland—bayesian inference based on a series of serological surveys
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10289354/
https://www.ncbi.nlm.nih.gov/pubmed/37352274
http://dx.doi.org/10.1371/journal.pone.0282094
work_keys_str_mv AT nieminentuomoa underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT auranenkari underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT kulathinalsangita underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT harkanentommi underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT melinmerit underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT palmuartoa underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys
AT jokinenjukka underreportingofsarscov2infectionsduringthefirstwaveofthe2020covid19epidemicinfinlandbayesianinferencebasedonaseriesofserologicalsurveys