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PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points

Photoplethysmography is a non-invasive technique used for measuring several vital signs and for the identification of individuals with an increased disease risk. Its principle of work is based on detecting changes in blood volume in the microvasculature of the skin through the absorption of light. T...

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Autores principales: Abdullah, Saad, Hafid, Abdelakram, Folke, Mia, Lindén, Maria, Kristoffersson, Annica
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10292016/
https://www.ncbi.nlm.nih.gov/pubmed/37378045
http://dx.doi.org/10.3389/fbioe.2023.1199604
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author Abdullah, Saad
Hafid, Abdelakram
Folke, Mia
Lindén, Maria
Kristoffersson, Annica
author_facet Abdullah, Saad
Hafid, Abdelakram
Folke, Mia
Lindén, Maria
Kristoffersson, Annica
author_sort Abdullah, Saad
collection PubMed
description Photoplethysmography is a non-invasive technique used for measuring several vital signs and for the identification of individuals with an increased disease risk. Its principle of work is based on detecting changes in blood volume in the microvasculature of the skin through the absorption of light. The extraction of relevant features from the photoplethysmography signal for estimating certain physiological parameters is a challenging task, where various feature extraction methods have been proposed in the literature. In this work, we present PPGFeat, a novel MATLAB toolbox supporting the analysis of raw photoplethysmography waveform data. PPGFeat allows for the application of various preprocessing techniques, such as filtering, smoothing, and removal of baseline drift; the calculation of photoplethysmography derivatives; and the implementation of algorithms for detecting and highlighting photoplethysmography fiducial points. PPGFeat includes a graphical user interface allowing users to perform various operations on photoplethysmography signals and to identify, and if required also adjust, the fiducial points. Evaluating the PPGFeat’s performance in identifying the fiducial points present in the publicly available PPG-BP dataset, resulted in an overall accuracy of 99% and 3038/3066 fiducial points were correctly identified. PPGFeat significantly reduces the risk of errors in identifying inaccurate fiducial points. Thereby, it is providing a valuable new resource for researchers for the analysis of photoplethysmography signals.
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spelling pubmed-102920162023-06-27 PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points Abdullah, Saad Hafid, Abdelakram Folke, Mia Lindén, Maria Kristoffersson, Annica Front Bioeng Biotechnol Bioengineering and Biotechnology Photoplethysmography is a non-invasive technique used for measuring several vital signs and for the identification of individuals with an increased disease risk. Its principle of work is based on detecting changes in blood volume in the microvasculature of the skin through the absorption of light. The extraction of relevant features from the photoplethysmography signal for estimating certain physiological parameters is a challenging task, where various feature extraction methods have been proposed in the literature. In this work, we present PPGFeat, a novel MATLAB toolbox supporting the analysis of raw photoplethysmography waveform data. PPGFeat allows for the application of various preprocessing techniques, such as filtering, smoothing, and removal of baseline drift; the calculation of photoplethysmography derivatives; and the implementation of algorithms for detecting and highlighting photoplethysmography fiducial points. PPGFeat includes a graphical user interface allowing users to perform various operations on photoplethysmography signals and to identify, and if required also adjust, the fiducial points. Evaluating the PPGFeat’s performance in identifying the fiducial points present in the publicly available PPG-BP dataset, resulted in an overall accuracy of 99% and 3038/3066 fiducial points were correctly identified. PPGFeat significantly reduces the risk of errors in identifying inaccurate fiducial points. Thereby, it is providing a valuable new resource for researchers for the analysis of photoplethysmography signals. Frontiers Media S.A. 2023-06-09 /pmc/articles/PMC10292016/ /pubmed/37378045 http://dx.doi.org/10.3389/fbioe.2023.1199604 Text en Copyright © 2023 Abdullah, Hafid, Folke, Lindén and Kristoffersson. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Abdullah, Saad
Hafid, Abdelakram
Folke, Mia
Lindén, Maria
Kristoffersson, Annica
PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title_full PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title_fullStr PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title_full_unstemmed PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title_short PPGFeat: a novel MATLAB toolbox for extracting PPG fiducial points
title_sort ppgfeat: a novel matlab toolbox for extracting ppg fiducial points
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10292016/
https://www.ncbi.nlm.nih.gov/pubmed/37378045
http://dx.doi.org/10.3389/fbioe.2023.1199604
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