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A skin lesion hair mask dataset with fine-grained annotations

Occlusion of skin lesions in dermoscopic images due to hair affects the performance of computer-assisted lesion analysis algorithms. Lesion analysis can benefit from digital hair removal or realistic hair simulation techniques. To assist in that process, we have created the largest publicly availabl...

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Autores principales: Hossain, Sk Imran, Roy, Sudipta Singha, De Goër De Herve, Jocelyn, Mercer, Robert E., Mephu Nguifo, Engelbert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10293994/
https://www.ncbi.nlm.nih.gov/pubmed/37383821
http://dx.doi.org/10.1016/j.dib.2023.109249
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author Hossain, Sk Imran
Roy, Sudipta Singha
De Goër De Herve, Jocelyn
Mercer, Robert E.
Mephu Nguifo, Engelbert
author_facet Hossain, Sk Imran
Roy, Sudipta Singha
De Goër De Herve, Jocelyn
Mercer, Robert E.
Mephu Nguifo, Engelbert
author_sort Hossain, Sk Imran
collection PubMed
description Occlusion of skin lesions in dermoscopic images due to hair affects the performance of computer-assisted lesion analysis algorithms. Lesion analysis can benefit from digital hair removal or realistic hair simulation techniques. To assist in that process, we have created the largest publicly available skin lesion hair segmentation mask dataset by carefully annotating 500 dermoscopic images. Compared to the existing datasets, our dataset is free of non-hair artifacts like ruler markers, bubbles, and ink marks. The dataset is also less prone to over and under segmentations because of fine-grained annotations and quality checks from multiple independent annotators. To create the dataset, first, we collected five hundred copyright-free CC0 licensed dermoscopic images covering different hair patterns. Second, we trained a deep learning hair segmentation model on a publicly available weakly annotated dataset. Third, we extracted hair masks for the selected five hundred images using the segmentation model. Finally, we manually corrected all the segmentation errors and verified the annotations by superimposing the annotated masks on top of the dermoscopic images. Multiple annotators were involved in the annotation and verification process to make the annotations as error-free as possible. The prepared dataset will be useful for benchmarking and training hair segmentation algorithms as well as creating realistic hair augmentation systems.
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spelling pubmed-102939942023-06-28 A skin lesion hair mask dataset with fine-grained annotations Hossain, Sk Imran Roy, Sudipta Singha De Goër De Herve, Jocelyn Mercer, Robert E. Mephu Nguifo, Engelbert Data Brief Data Article Occlusion of skin lesions in dermoscopic images due to hair affects the performance of computer-assisted lesion analysis algorithms. Lesion analysis can benefit from digital hair removal or realistic hair simulation techniques. To assist in that process, we have created the largest publicly available skin lesion hair segmentation mask dataset by carefully annotating 500 dermoscopic images. Compared to the existing datasets, our dataset is free of non-hair artifacts like ruler markers, bubbles, and ink marks. The dataset is also less prone to over and under segmentations because of fine-grained annotations and quality checks from multiple independent annotators. To create the dataset, first, we collected five hundred copyright-free CC0 licensed dermoscopic images covering different hair patterns. Second, we trained a deep learning hair segmentation model on a publicly available weakly annotated dataset. Third, we extracted hair masks for the selected five hundred images using the segmentation model. Finally, we manually corrected all the segmentation errors and verified the annotations by superimposing the annotated masks on top of the dermoscopic images. Multiple annotators were involved in the annotation and verification process to make the annotations as error-free as possible. The prepared dataset will be useful for benchmarking and training hair segmentation algorithms as well as creating realistic hair augmentation systems. Elsevier 2023-05-18 /pmc/articles/PMC10293994/ /pubmed/37383821 http://dx.doi.org/10.1016/j.dib.2023.109249 Text en © 2023 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Hossain, Sk Imran
Roy, Sudipta Singha
De Goër De Herve, Jocelyn
Mercer, Robert E.
Mephu Nguifo, Engelbert
A skin lesion hair mask dataset with fine-grained annotations
title A skin lesion hair mask dataset with fine-grained annotations
title_full A skin lesion hair mask dataset with fine-grained annotations
title_fullStr A skin lesion hair mask dataset with fine-grained annotations
title_full_unstemmed A skin lesion hair mask dataset with fine-grained annotations
title_short A skin lesion hair mask dataset with fine-grained annotations
title_sort skin lesion hair mask dataset with fine-grained annotations
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10293994/
https://www.ncbi.nlm.nih.gov/pubmed/37383821
http://dx.doi.org/10.1016/j.dib.2023.109249
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