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Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing

Leveraging computation in the development of peptide therapeutics has garnered increasing recognition as a valuable tool to generate novel therapeutics for disease-related targets. To this end, computation has transformed the field of peptide design through identifying novel therapeutics that exhibi...

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Autores principales: Kazmirchuk, Thomas David Daniel, Bradbury-Jost, Calvin, Withey, Taylor Ann, Gessese, Tadesse, Azad, Taha, Samanfar, Bahram, Dehne, Frank, Golshani, Ashkan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10298604/
https://www.ncbi.nlm.nih.gov/pubmed/37372372
http://dx.doi.org/10.3390/genes14061194
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author Kazmirchuk, Thomas David Daniel
Bradbury-Jost, Calvin
Withey, Taylor Ann
Gessese, Tadesse
Azad, Taha
Samanfar, Bahram
Dehne, Frank
Golshani, Ashkan
author_facet Kazmirchuk, Thomas David Daniel
Bradbury-Jost, Calvin
Withey, Taylor Ann
Gessese, Tadesse
Azad, Taha
Samanfar, Bahram
Dehne, Frank
Golshani, Ashkan
author_sort Kazmirchuk, Thomas David Daniel
collection PubMed
description Leveraging computation in the development of peptide therapeutics has garnered increasing recognition as a valuable tool to generate novel therapeutics for disease-related targets. To this end, computation has transformed the field of peptide design through identifying novel therapeutics that exhibit enhanced pharmacokinetic properties and reduced toxicity. The process of in-silico peptide design involves the application of molecular docking, molecular dynamics simulations, and machine learning algorithms. Three primary approaches for peptide therapeutic design including structural-based, protein mimicry, and short motif design have been predominantly adopted. Despite the ongoing progress made in this field, there are still significant challenges pertaining to peptide design including: enhancing the accuracy of computational methods; improving the success rate of preclinical and clinical trials; and developing better strategies to predict pharmacokinetics and toxicity. In this review, we discuss past and present research pertaining to the design and development of in-silico peptide therapeutics in addition to highlighting the potential of computation and artificial intelligence in the future of disease therapeutics.
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spelling pubmed-102986042023-06-28 Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing Kazmirchuk, Thomas David Daniel Bradbury-Jost, Calvin Withey, Taylor Ann Gessese, Tadesse Azad, Taha Samanfar, Bahram Dehne, Frank Golshani, Ashkan Genes (Basel) Review Leveraging computation in the development of peptide therapeutics has garnered increasing recognition as a valuable tool to generate novel therapeutics for disease-related targets. To this end, computation has transformed the field of peptide design through identifying novel therapeutics that exhibit enhanced pharmacokinetic properties and reduced toxicity. The process of in-silico peptide design involves the application of molecular docking, molecular dynamics simulations, and machine learning algorithms. Three primary approaches for peptide therapeutic design including structural-based, protein mimicry, and short motif design have been predominantly adopted. Despite the ongoing progress made in this field, there are still significant challenges pertaining to peptide design including: enhancing the accuracy of computational methods; improving the success rate of preclinical and clinical trials; and developing better strategies to predict pharmacokinetics and toxicity. In this review, we discuss past and present research pertaining to the design and development of in-silico peptide therapeutics in addition to highlighting the potential of computation and artificial intelligence in the future of disease therapeutics. MDPI 2023-05-29 /pmc/articles/PMC10298604/ /pubmed/37372372 http://dx.doi.org/10.3390/genes14061194 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Kazmirchuk, Thomas David Daniel
Bradbury-Jost, Calvin
Withey, Taylor Ann
Gessese, Tadesse
Azad, Taha
Samanfar, Bahram
Dehne, Frank
Golshani, Ashkan
Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title_full Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title_fullStr Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title_full_unstemmed Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title_short Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
title_sort peptides of a feather: how computation is taking peptide therapeutics under its wing
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10298604/
https://www.ncbi.nlm.nih.gov/pubmed/37372372
http://dx.doi.org/10.3390/genes14061194
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