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Skipper analysis of eCLIP datasets enables sensitive detection of constrained translation factor binding sites
Technology for crosslinking and immunoprecipitation (CLIP) followed by sequencing (CLIP-seq) has identified the transcriptomic targets of hundreds of RNA-binding proteins in cells. To increase the power of existing and future CLIP-seq datasets, we introduce Skipper, an end-to-end workflow that conve...
Autores principales: | Boyle, Evan A., Her, Hsuan-Lin, Mueller, Jasmine R., Naritomi, Jack T., Nguyen, Grady G., Yeo, Gene W. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10300551/ https://www.ncbi.nlm.nih.gov/pubmed/37388912 http://dx.doi.org/10.1016/j.xgen.2023.100317 |
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