Cargando…

A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)

Determination of chemotypes and of their role in the polymorphism of populations is an important field in the research on secondary metabolites of plants. In the present study, by gas chromatography coupled with mass spectrometry, the composition of bark extracts from rowan S. aucuparia subsp. sibir...

Descripción completa

Detalles Bibliográficos
Autores principales: Vasilieva, Asya R., Slynko, Nikolay M., Tatarova, Ljudmila E., Efimov, Vadim M., Kuibida, Leonid V., Asbaganov, Sergey V., Peltek, Sergey E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10301433/
https://www.ncbi.nlm.nih.gov/pubmed/37367925
http://dx.doi.org/10.3390/metabo13060768
_version_ 1785064810795237376
author Vasilieva, Asya R.
Slynko, Nikolay M.
Tatarova, Ljudmila E.
Efimov, Vadim M.
Kuibida, Leonid V.
Asbaganov, Sergey V.
Peltek, Sergey E.
author_facet Vasilieva, Asya R.
Slynko, Nikolay M.
Tatarova, Ljudmila E.
Efimov, Vadim M.
Kuibida, Leonid V.
Asbaganov, Sergey V.
Peltek, Sergey E.
author_sort Vasilieva, Asya R.
collection PubMed
description Determination of chemotypes and of their role in the polymorphism of populations is an important field in the research on secondary metabolites of plants. In the present study, by gas chromatography coupled with mass spectrometry, the composition of bark extracts from rowan S. aucuparia subsp. sibirica was determined for 16 trees growing within Akademgorodok of Novosibirsk, with bark samples collected both in winter and summer. Among 101 fully or partially identified metabolites, there are alkanes, alkenes, linear alcohols, fatty acids and their derivatives, phenols and their derivatives, prunasin and its parent and derivative compounds, polyprenes and their derivatives, cyclic diterpenes, and phytosterols. These compounds were grouped according to their biosynthesis pathways. Cluster analysis revealed two groups among the bark samples collected in winter and three groups among bark samples collected in summer. The key determinants of this clustering are the biosynthesis of metabolites via the cyanogenic pathway (especially potentially toxic prunasin) and their formation via the phytosterol pathway (especially potentially pharmacologically useful lupeol). It follows from the results that the presence of chemotypes having sharply different profiles of metabolites in a population from a small geographic area invalidates the practice of general sampling to obtain averaged data when a population is described. From the standpoint of possible industrial use or plant selection based on metabolomic data, it is possible to select specific sets of samples containing a minimal amount of potentially toxic compounds and the largest amount of potentially useful substances.
format Online
Article
Text
id pubmed-10301433
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103014332023-06-29 A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia) Vasilieva, Asya R. Slynko, Nikolay M. Tatarova, Ljudmila E. Efimov, Vadim M. Kuibida, Leonid V. Asbaganov, Sergey V. Peltek, Sergey E. Metabolites Article Determination of chemotypes and of their role in the polymorphism of populations is an important field in the research on secondary metabolites of plants. In the present study, by gas chromatography coupled with mass spectrometry, the composition of bark extracts from rowan S. aucuparia subsp. sibirica was determined for 16 trees growing within Akademgorodok of Novosibirsk, with bark samples collected both in winter and summer. Among 101 fully or partially identified metabolites, there are alkanes, alkenes, linear alcohols, fatty acids and their derivatives, phenols and their derivatives, prunasin and its parent and derivative compounds, polyprenes and their derivatives, cyclic diterpenes, and phytosterols. These compounds were grouped according to their biosynthesis pathways. Cluster analysis revealed two groups among the bark samples collected in winter and three groups among bark samples collected in summer. The key determinants of this clustering are the biosynthesis of metabolites via the cyanogenic pathway (especially potentially toxic prunasin) and their formation via the phytosterol pathway (especially potentially pharmacologically useful lupeol). It follows from the results that the presence of chemotypes having sharply different profiles of metabolites in a population from a small geographic area invalidates the practice of general sampling to obtain averaged data when a population is described. From the standpoint of possible industrial use or plant selection based on metabolomic data, it is possible to select specific sets of samples containing a minimal amount of potentially toxic compounds and the largest amount of potentially useful substances. MDPI 2023-06-19 /pmc/articles/PMC10301433/ /pubmed/37367925 http://dx.doi.org/10.3390/metabo13060768 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Vasilieva, Asya R.
Slynko, Nikolay M.
Tatarova, Ljudmila E.
Efimov, Vadim M.
Kuibida, Leonid V.
Asbaganov, Sergey V.
Peltek, Sergey E.
A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title_full A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title_fullStr A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title_full_unstemmed A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title_short A GC-MS Chemotaxonomic Study on Lipophilic Compounds in the Bark of S. aucuparia subsp. sibirica Trees from the Population Growing in Akademgorodok, Novosibirsk (Russia)
title_sort gc-ms chemotaxonomic study on lipophilic compounds in the bark of s. aucuparia subsp. sibirica trees from the population growing in akademgorodok, novosibirsk (russia)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10301433/
https://www.ncbi.nlm.nih.gov/pubmed/37367925
http://dx.doi.org/10.3390/metabo13060768
work_keys_str_mv AT vasilievaasyar agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT slynkonikolaym agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT tatarovaljudmilae agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT efimovvadimm agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT kuibidaleonidv agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT asbaganovsergeyv agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT pelteksergeye agcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT vasilievaasyar gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT slynkonikolaym gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT tatarovaljudmilae gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT efimovvadimm gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT kuibidaleonidv gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT asbaganovsergeyv gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia
AT pelteksergeye gcmschemotaxonomicstudyonlipophiliccompoundsinthebarkofsaucupariasubspsibiricatreesfromthepopulationgrowinginakademgorodoknovosibirskrussia