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PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters
To develop standard optical biosensors, the simulation procedure takes a lot of time. For reducing that enormous amount of time and effort, machine learning might be a better solution. Effective indices, core power, total power, and effective area are the most crucial parameters for evaluating optic...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10302917/ https://www.ncbi.nlm.nih.gov/pubmed/37374757 http://dx.doi.org/10.3390/mi14061174 |
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author | Ahmed, Kawsar Bui, Francis M. Wu, Fang-Xiang |
author_facet | Ahmed, Kawsar Bui, Francis M. Wu, Fang-Xiang |
author_sort | Ahmed, Kawsar |
collection | PubMed |
description | To develop standard optical biosensors, the simulation procedure takes a lot of time. For reducing that enormous amount of time and effort, machine learning might be a better solution. Effective indices, core power, total power, and effective area are the most crucial parameters for evaluating optical sensors. In this study, several machine learning (ML) approaches have been applied to predict those parameters while considering the core radius, cladding radius, pitch, analyte, and wavelength as the input vectors. We have utilized least squares (LS), LASSO, Elastic-Net (ENet), and Bayesian ridge regression (BRR) to make a comparative discussion using a balanced dataset obtained with the COMSOL Multiphysics simulation tool. Furthermore, a more extensive analysis of sensitivity, power fraction, and confinement loss is also demonstrated using the predicted and simulated data. The suggested models were also examined in terms of [Formula: see text]-score, mean average error (MAE), and mean squared error (MSE), with all of the models having an [Formula: see text]-score of more than 0.99, and it was also shown that optical biosensors had a design error rate of less than 3%. This research might pave the way for machine learning-based optimization approaches to be used to improve optical biosensors. |
format | Online Article Text |
id | pubmed-10302917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103029172023-06-29 PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters Ahmed, Kawsar Bui, Francis M. Wu, Fang-Xiang Micromachines (Basel) Article To develop standard optical biosensors, the simulation procedure takes a lot of time. For reducing that enormous amount of time and effort, machine learning might be a better solution. Effective indices, core power, total power, and effective area are the most crucial parameters for evaluating optical sensors. In this study, several machine learning (ML) approaches have been applied to predict those parameters while considering the core radius, cladding radius, pitch, analyte, and wavelength as the input vectors. We have utilized least squares (LS), LASSO, Elastic-Net (ENet), and Bayesian ridge regression (BRR) to make a comparative discussion using a balanced dataset obtained with the COMSOL Multiphysics simulation tool. Furthermore, a more extensive analysis of sensitivity, power fraction, and confinement loss is also demonstrated using the predicted and simulated data. The suggested models were also examined in terms of [Formula: see text]-score, mean average error (MAE), and mean squared error (MSE), with all of the models having an [Formula: see text]-score of more than 0.99, and it was also shown that optical biosensors had a design error rate of less than 3%. This research might pave the way for machine learning-based optimization approaches to be used to improve optical biosensors. MDPI 2023-05-31 /pmc/articles/PMC10302917/ /pubmed/37374757 http://dx.doi.org/10.3390/mi14061174 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ahmed, Kawsar Bui, Francis M. Wu, Fang-Xiang PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title | PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title_full | PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title_fullStr | PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title_full_unstemmed | PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title_short | PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters |
title_sort | preobp_ml: machine learning algorithms for prediction of optical biosensor parameters |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10302917/ https://www.ncbi.nlm.nih.gov/pubmed/37374757 http://dx.doi.org/10.3390/mi14061174 |
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