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Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development

TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were i...

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Autores principales: Xu, Lanruoyan, Liu, Ailian, Wang, Tianyu, Wang, Yuhao, Li, Liangjun, Wu, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305134/
https://www.ncbi.nlm.nih.gov/pubmed/37375948
http://dx.doi.org/10.3390/plants12122323
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author Xu, Lanruoyan
Liu, Ailian
Wang, Tianyu
Wang, Yuhao
Li, Liangjun
Wu, Peng
author_facet Xu, Lanruoyan
Liu, Ailian
Wang, Tianyu
Wang, Yuhao
Li, Liangjun
Wu, Peng
author_sort Xu, Lanruoyan
collection PubMed
description TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were identified in E. ferox. Phylogenetic analyses of the TIFY genes showed clustering into three groups (JAZ, ZIM, and PPD). The TIFY domain was shown to be conserved. JAZ was mainly expanded via wholegenome triplication (WGT) in E. ferox. Based on analyses of the TIFY genes in nine species, we found that JAZ has a closer relationship with PPD, in addition to appearing the most recently and expanding most rapidly, leading to the rapid expansion of TIFYs in Nymphaeaceae. In addition, their different evolution types were discovered. Different gene expressions showed the distinct and corresponsive expression patterns of the EfTIFYs in different stages of tissue and leaf development. Finally, The qPCR analysis revealed that the expression of EfTIFY7.2 and EfTIFY10.1 showed an upward trend and high expression throughout leaf development. Further co-expression analysis indicated that EfTIFY7.2 might be more important for the development of E. ferox leaves. This information will be valuable when exploring the molecular mechanisms of EfTIFYs in plants.
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spelling pubmed-103051342023-06-29 Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development Xu, Lanruoyan Liu, Ailian Wang, Tianyu Wang, Yuhao Li, Liangjun Wu, Peng Plants (Basel) Article TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were identified in E. ferox. Phylogenetic analyses of the TIFY genes showed clustering into three groups (JAZ, ZIM, and PPD). The TIFY domain was shown to be conserved. JAZ was mainly expanded via wholegenome triplication (WGT) in E. ferox. Based on analyses of the TIFY genes in nine species, we found that JAZ has a closer relationship with PPD, in addition to appearing the most recently and expanding most rapidly, leading to the rapid expansion of TIFYs in Nymphaeaceae. In addition, their different evolution types were discovered. Different gene expressions showed the distinct and corresponsive expression patterns of the EfTIFYs in different stages of tissue and leaf development. Finally, The qPCR analysis revealed that the expression of EfTIFY7.2 and EfTIFY10.1 showed an upward trend and high expression throughout leaf development. Further co-expression analysis indicated that EfTIFY7.2 might be more important for the development of E. ferox leaves. This information will be valuable when exploring the molecular mechanisms of EfTIFYs in plants. MDPI 2023-06-15 /pmc/articles/PMC10305134/ /pubmed/37375948 http://dx.doi.org/10.3390/plants12122323 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xu, Lanruoyan
Liu, Ailian
Wang, Tianyu
Wang, Yuhao
Li, Liangjun
Wu, Peng
Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title_full Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title_fullStr Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title_full_unstemmed Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title_short Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
title_sort characterization and coexpression analysis of the tify family genes in euryale ferox related to leaf development
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305134/
https://www.ncbi.nlm.nih.gov/pubmed/37375948
http://dx.doi.org/10.3390/plants12122323
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