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Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development
TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305134/ https://www.ncbi.nlm.nih.gov/pubmed/37375948 http://dx.doi.org/10.3390/plants12122323 |
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author | Xu, Lanruoyan Liu, Ailian Wang, Tianyu Wang, Yuhao Li, Liangjun Wu, Peng |
author_facet | Xu, Lanruoyan Liu, Ailian Wang, Tianyu Wang, Yuhao Li, Liangjun Wu, Peng |
author_sort | Xu, Lanruoyan |
collection | PubMed |
description | TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were identified in E. ferox. Phylogenetic analyses of the TIFY genes showed clustering into three groups (JAZ, ZIM, and PPD). The TIFY domain was shown to be conserved. JAZ was mainly expanded via wholegenome triplication (WGT) in E. ferox. Based on analyses of the TIFY genes in nine species, we found that JAZ has a closer relationship with PPD, in addition to appearing the most recently and expanding most rapidly, leading to the rapid expansion of TIFYs in Nymphaeaceae. In addition, their different evolution types were discovered. Different gene expressions showed the distinct and corresponsive expression patterns of the EfTIFYs in different stages of tissue and leaf development. Finally, The qPCR analysis revealed that the expression of EfTIFY7.2 and EfTIFY10.1 showed an upward trend and high expression throughout leaf development. Further co-expression analysis indicated that EfTIFY7.2 might be more important for the development of E. ferox leaves. This information will be valuable when exploring the molecular mechanisms of EfTIFYs in plants. |
format | Online Article Text |
id | pubmed-10305134 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103051342023-06-29 Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development Xu, Lanruoyan Liu, Ailian Wang, Tianyu Wang, Yuhao Li, Liangjun Wu, Peng Plants (Basel) Article TIFYs are plant-specific transcription factors that contain the TIFY structural domain and play an important role in plant leaf growth and development. However, the role played by TIFY in E. ferox (Euryale ferox Salisb.) leaf development has not been investigated. In this study, 23 TIFY genes were identified in E. ferox. Phylogenetic analyses of the TIFY genes showed clustering into three groups (JAZ, ZIM, and PPD). The TIFY domain was shown to be conserved. JAZ was mainly expanded via wholegenome triplication (WGT) in E. ferox. Based on analyses of the TIFY genes in nine species, we found that JAZ has a closer relationship with PPD, in addition to appearing the most recently and expanding most rapidly, leading to the rapid expansion of TIFYs in Nymphaeaceae. In addition, their different evolution types were discovered. Different gene expressions showed the distinct and corresponsive expression patterns of the EfTIFYs in different stages of tissue and leaf development. Finally, The qPCR analysis revealed that the expression of EfTIFY7.2 and EfTIFY10.1 showed an upward trend and high expression throughout leaf development. Further co-expression analysis indicated that EfTIFY7.2 might be more important for the development of E. ferox leaves. This information will be valuable when exploring the molecular mechanisms of EfTIFYs in plants. MDPI 2023-06-15 /pmc/articles/PMC10305134/ /pubmed/37375948 http://dx.doi.org/10.3390/plants12122323 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xu, Lanruoyan Liu, Ailian Wang, Tianyu Wang, Yuhao Li, Liangjun Wu, Peng Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title | Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title_full | Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title_fullStr | Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title_full_unstemmed | Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title_short | Characterization and Coexpression Analysis of the TIFY Family Genes in Euryale ferox Related to Leaf Development |
title_sort | characterization and coexpression analysis of the tify family genes in euryale ferox related to leaf development |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305134/ https://www.ncbi.nlm.nih.gov/pubmed/37375948 http://dx.doi.org/10.3390/plants12122323 |
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