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DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function

The structure and topology of the pulmonary arteries is crucial to understand, plan, and conduct medical treatment in the thorax area. Due to the complex anatomy of the pulmonary vessels, it is not easy to distinguish between the arteries and veins. The pulmonary arteries have a complex structure wi...

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Autores principales: Zulfiqar, Manahil, Stanuch, Maciej, Wodzinski, Marek, Skalski, Andrzej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305594/
https://www.ncbi.nlm.nih.gov/pubmed/37420595
http://dx.doi.org/10.3390/s23125427
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author Zulfiqar, Manahil
Stanuch, Maciej
Wodzinski, Marek
Skalski, Andrzej
author_facet Zulfiqar, Manahil
Stanuch, Maciej
Wodzinski, Marek
Skalski, Andrzej
author_sort Zulfiqar, Manahil
collection PubMed
description The structure and topology of the pulmonary arteries is crucial to understand, plan, and conduct medical treatment in the thorax area. Due to the complex anatomy of the pulmonary vessels, it is not easy to distinguish between the arteries and veins. The pulmonary arteries have a complex structure with an irregular shape and adjacent tissues, which makes automatic segmentation a challenging task. A deep neural network is required to segment the topological structure of the pulmonary artery. Therefore, in this study, a Dense Residual U-Net with a hybrid loss function is proposed. The network is trained on augmented Computed Tomography volumes to improve the performance of the network and prevent overfitting. Moreover, the hybrid loss function is implemented to improve the performance of the network. The results show an improvement in the Dice and HD95 scores over state-of-the-art techniques. The average scores achieved for the Dice and HD95 scores are 0.8775 and 4.2624 mm, respectively. The proposed method will support physicians in the challenging task of preoperative planning of thoracic surgery, where the correct assessment of the arteries is crucial.
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spelling pubmed-103055942023-06-29 DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function Zulfiqar, Manahil Stanuch, Maciej Wodzinski, Marek Skalski, Andrzej Sensors (Basel) Article The structure and topology of the pulmonary arteries is crucial to understand, plan, and conduct medical treatment in the thorax area. Due to the complex anatomy of the pulmonary vessels, it is not easy to distinguish between the arteries and veins. The pulmonary arteries have a complex structure with an irregular shape and adjacent tissues, which makes automatic segmentation a challenging task. A deep neural network is required to segment the topological structure of the pulmonary artery. Therefore, in this study, a Dense Residual U-Net with a hybrid loss function is proposed. The network is trained on augmented Computed Tomography volumes to improve the performance of the network and prevent overfitting. Moreover, the hybrid loss function is implemented to improve the performance of the network. The results show an improvement in the Dice and HD95 scores over state-of-the-art techniques. The average scores achieved for the Dice and HD95 scores are 0.8775 and 4.2624 mm, respectively. The proposed method will support physicians in the challenging task of preoperative planning of thoracic surgery, where the correct assessment of the arteries is crucial. MDPI 2023-06-08 /pmc/articles/PMC10305594/ /pubmed/37420595 http://dx.doi.org/10.3390/s23125427 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zulfiqar, Manahil
Stanuch, Maciej
Wodzinski, Marek
Skalski, Andrzej
DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title_full DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title_fullStr DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title_full_unstemmed DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title_short DRU-Net: Pulmonary Artery Segmentation via Dense Residual U-Network with Hybrid Loss Function
title_sort dru-net: pulmonary artery segmentation via dense residual u-network with hybrid loss function
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10305594/
https://www.ncbi.nlm.nih.gov/pubmed/37420595
http://dx.doi.org/10.3390/s23125427
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