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Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer
BACKGROUND: Gut microbiome plays an indispensable role in the occurrence and progression in various diseases. The incidence of pancreatic cancer (PC) and liver metastasis (PCLM) are high, most of them are found in advanced stage. Therefore, it is particularly necessary to search for predictive bioma...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10306441/ https://www.ncbi.nlm.nih.gov/pubmed/37389332 http://dx.doi.org/10.3389/fmicb.2023.1184869 |
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author | Yang, Jinru Ma, Yuxi Tan, Qiaoyun Zhou, Bin Yu, Dandan Jin, Min Zhang, Tao Liu, Junli Liu, Hongli |
author_facet | Yang, Jinru Ma, Yuxi Tan, Qiaoyun Zhou, Bin Yu, Dandan Jin, Min Zhang, Tao Liu, Junli Liu, Hongli |
author_sort | Yang, Jinru |
collection | PubMed |
description | BACKGROUND: Gut microbiome plays an indispensable role in the occurrence and progression in various diseases. The incidence of pancreatic cancer (PC) and liver metastasis (PCLM) are high, most of them are found in advanced stage. Therefore, it is particularly necessary to search for predictive biomarkers, which are helpful for early detection and treatment, and thus improve the survival rate and quality of life of PC patients. METHODS: We retrospectively analyzed 44 pancreatic cancer patients (P group, n = 44) and 50 healthy people (N group, n = 50) from March 21, 2021 and August 2, 2022. Among all PC patients, we divided them into liver metastasis group (LM group, n = 27) and non-liver metastasis group (non-LM group, n = 17). DNA was extracted and 16S ribosomal RNA (16S rRNA) gene sequencing was performed. SPSS was used for statistical analyses and all bioinformatics analyses were based on QIIME2, p < 0.05 were considered statistically significant. RESULTS: The microbial richness and diversity of group P and LM were higher than that of group N and non-LM. LEfSe analysis found that Streptococcus was a significantly different microorganism, which was further identified by random forest (RF) model, and its ability to predict PC and PCLM was verified by ROC curve. CONCLUSION: We demonstrated significant differences in intestinal microbiome composition between PC patients and healthy people, and found that Streptococcus is a potential biomarker for early prediction of PC and PCLM, which is critical for early diagnosis of diseases. |
format | Online Article Text |
id | pubmed-10306441 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103064412023-06-29 Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer Yang, Jinru Ma, Yuxi Tan, Qiaoyun Zhou, Bin Yu, Dandan Jin, Min Zhang, Tao Liu, Junli Liu, Hongli Front Microbiol Microbiology BACKGROUND: Gut microbiome plays an indispensable role in the occurrence and progression in various diseases. The incidence of pancreatic cancer (PC) and liver metastasis (PCLM) are high, most of them are found in advanced stage. Therefore, it is particularly necessary to search for predictive biomarkers, which are helpful for early detection and treatment, and thus improve the survival rate and quality of life of PC patients. METHODS: We retrospectively analyzed 44 pancreatic cancer patients (P group, n = 44) and 50 healthy people (N group, n = 50) from March 21, 2021 and August 2, 2022. Among all PC patients, we divided them into liver metastasis group (LM group, n = 27) and non-liver metastasis group (non-LM group, n = 17). DNA was extracted and 16S ribosomal RNA (16S rRNA) gene sequencing was performed. SPSS was used for statistical analyses and all bioinformatics analyses were based on QIIME2, p < 0.05 were considered statistically significant. RESULTS: The microbial richness and diversity of group P and LM were higher than that of group N and non-LM. LEfSe analysis found that Streptococcus was a significantly different microorganism, which was further identified by random forest (RF) model, and its ability to predict PC and PCLM was verified by ROC curve. CONCLUSION: We demonstrated significant differences in intestinal microbiome composition between PC patients and healthy people, and found that Streptococcus is a potential biomarker for early prediction of PC and PCLM, which is critical for early diagnosis of diseases. Frontiers Media S.A. 2023-06-14 /pmc/articles/PMC10306441/ /pubmed/37389332 http://dx.doi.org/10.3389/fmicb.2023.1184869 Text en Copyright © 2023 Yang, Ma, Tan, Zhou, Yu, Jin, Zhang, Liu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Yang, Jinru Ma, Yuxi Tan, Qiaoyun Zhou, Bin Yu, Dandan Jin, Min Zhang, Tao Liu, Junli Liu, Hongli Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title | Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title_full | Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title_fullStr | Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title_full_unstemmed | Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title_short | Gut Streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
title_sort | gut streptococcus is a microbial marker for the occurrence and liver metastasis of pancreatic cancer |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10306441/ https://www.ncbi.nlm.nih.gov/pubmed/37389332 http://dx.doi.org/10.3389/fmicb.2023.1184869 |
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