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Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data

Background  FAIR Guiding Principles present a synergy with the use cases for digital health records, in that clinical data need to be found, accessible within a range of environments, and data must interoperate between systems and subsequently reused. The use of HL7 FHIR, openEHR, IHE XDS, and SNOME...

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Autores principales: Meredith, John, Whitehead, Nik, Dacey, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Georg Thieme Verlag KG 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10306448/
https://www.ncbi.nlm.nih.gov/pubmed/36473495
http://dx.doi.org/10.1055/a-1993-8036
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author Meredith, John
Whitehead, Nik
Dacey, Michael
author_facet Meredith, John
Whitehead, Nik
Dacey, Michael
author_sort Meredith, John
collection PubMed
description Background  FAIR Guiding Principles present a synergy with the use cases for digital health records, in that clinical data need to be found, accessible within a range of environments, and data must interoperate between systems and subsequently reused. The use of HL7 FHIR, openEHR, IHE XDS, and SNOMED CT (FOXS) together represents a specification to create an open digital health platform for modern health care applications. Objectives  To describe where logical FOXS components align to the European Open Science Cloud Interoperability Framework (EOSC-IF) reference architecture for semantic interoperability. This should provide a means of defining if FOXS aligns to FAIR principles and to establish the data models and structures that support longitudinal care records as being fit to underpin scientific research. Methods  The EOSC-IF Semantic View is a representation of semantic interoperability where meaning is preserved between systems and users. This was analyzed and cross-referenced with FOXS architectural components, mapping concepts, and objects that describe content such as catalogues and semantic artifacts. Results  Majority of conceptual Semantic View components were featured within the FOXS architecture. Semantic Business Objects are composed of a range of elements such as openEHR archetypes and templates, FHIR resources and profiles, SNOMED CT concepts, and XDS document identifiers. Semantic Functional Content comprises catalogues of metadata that were also supported by openEHR and FHIR tools. Conclusions  Despite some elements of EOSC-IF being vague (e.g., FAIR Digital Object), there was a broad conformance to the framework concepts and the components of a FOXS platform. This work supports a health-domain-specific view of semantic interoperability and how this may be achieved to support FAIR data for health research via a standardized framework.
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spelling pubmed-103064482023-06-29 Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data Meredith, John Whitehead, Nik Dacey, Michael Methods Inf Med Background  FAIR Guiding Principles present a synergy with the use cases for digital health records, in that clinical data need to be found, accessible within a range of environments, and data must interoperate between systems and subsequently reused. The use of HL7 FHIR, openEHR, IHE XDS, and SNOMED CT (FOXS) together represents a specification to create an open digital health platform for modern health care applications. Objectives  To describe where logical FOXS components align to the European Open Science Cloud Interoperability Framework (EOSC-IF) reference architecture for semantic interoperability. This should provide a means of defining if FOXS aligns to FAIR principles and to establish the data models and structures that support longitudinal care records as being fit to underpin scientific research. Methods  The EOSC-IF Semantic View is a representation of semantic interoperability where meaning is preserved between systems and users. This was analyzed and cross-referenced with FOXS architectural components, mapping concepts, and objects that describe content such as catalogues and semantic artifacts. Results  Majority of conceptual Semantic View components were featured within the FOXS architecture. Semantic Business Objects are composed of a range of elements such as openEHR archetypes and templates, FHIR resources and profiles, SNOMED CT concepts, and XDS document identifiers. Semantic Functional Content comprises catalogues of metadata that were also supported by openEHR and FHIR tools. Conclusions  Despite some elements of EOSC-IF being vague (e.g., FAIR Digital Object), there was a broad conformance to the framework concepts and the components of a FOXS platform. This work supports a health-domain-specific view of semantic interoperability and how this may be achieved to support FAIR data for health research via a standardized framework. Georg Thieme Verlag KG 2023-02-13 /pmc/articles/PMC10306448/ /pubmed/36473495 http://dx.doi.org/10.1055/a-1993-8036 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution-NonDerivative-NonCommercial License, permitting copying and reproduction so long as the original work is given appropriate credit. Contents may not be used for commercial purposes, or adapted, remixed, transformed or built upon. ( https://creativecommons.org/licenses/by-nc-nd/4.0/ ) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Meredith, John
Whitehead, Nik
Dacey, Michael
Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title_full Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title_fullStr Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title_full_unstemmed Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title_short Aligning Semantic Interoperability Frameworks with the FOXS Stack for FAIR Health Data
title_sort aligning semantic interoperability frameworks with the foxs stack for fair health data
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10306448/
https://www.ncbi.nlm.nih.gov/pubmed/36473495
http://dx.doi.org/10.1055/a-1993-8036
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