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Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population
BACKGROUND: Mild cognitive impairment (MCI) is considered a preclinical stage of Alzheimer’s disease (AD). People with MCI have a higher risk of developing dementia than healthy people. As one of the risk factors for MCI, stroke has been actively treated and intervened. Therefore, selecting the high...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10308219/ https://www.ncbi.nlm.nih.gov/pubmed/37396650 http://dx.doi.org/10.3389/fnagi.2023.1180351 |
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author | Yan, Feng-Juan Chen, Xie-Hui Quan, Xiao-Qing Wang, Li-Li Wei, Xin-Yi Zhu, Jia-Liang |
author_facet | Yan, Feng-Juan Chen, Xie-Hui Quan, Xiao-Qing Wang, Li-Li Wei, Xin-Yi Zhu, Jia-Liang |
author_sort | Yan, Feng-Juan |
collection | PubMed |
description | BACKGROUND: Mild cognitive impairment (MCI) is considered a preclinical stage of Alzheimer’s disease (AD). People with MCI have a higher risk of developing dementia than healthy people. As one of the risk factors for MCI, stroke has been actively treated and intervened. Therefore, selecting the high-risk population of stroke as the research object and discovering the risk factors of MCI as early as possible can prevent the occurrence of MCI more effectively. METHODS: The Boruta algorithm was used to screen variables, and eight machine learning models were established and evaluated. The best performing models were used to assess variable importance and build an online risk calculator. Shapley additive explanation is used to explain the model. RESULTS: A total of 199 patients were included in the study, 99 of whom were male. Transient ischemic attack (TIA), homocysteine, education, hematocrit (HCT), diabetes, hemoglobin, red blood cells (RBC), hypertension, prothrombin time (PT) were selected by Boruta algorithm. Logistic regression (AUC = 0.8595) was the best model for predicting MCI in high-risk groups of stroke, followed by elastic network (ENET) (AUC = 0.8312), multilayer perceptron (MLP) (AUC = 0.7908), extreme gradient boosting (XGBoost) (AUC = 0.7691), and support vector machine (SVM) (AUC = 0.7527), random forest (RF) (AUC = 0.7451), K-nearest neighbors (KNN) (AUC = 0.7380), decision tree (DT) (AUC = 0.6972). The importance of variables suggests that TIA, diabetes, education, and hypertension are the top four variables of importance. CONCLUSION: Transient ischemic attack (TIA), diabetes, education, and hypertension are the most important risk factors for MCI in high-risk groups of stroke, and early intervention should be performed to reduce the occurrence of MCI. |
format | Online Article Text |
id | pubmed-10308219 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103082192023-06-30 Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population Yan, Feng-Juan Chen, Xie-Hui Quan, Xiao-Qing Wang, Li-Li Wei, Xin-Yi Zhu, Jia-Liang Front Aging Neurosci Neuroscience BACKGROUND: Mild cognitive impairment (MCI) is considered a preclinical stage of Alzheimer’s disease (AD). People with MCI have a higher risk of developing dementia than healthy people. As one of the risk factors for MCI, stroke has been actively treated and intervened. Therefore, selecting the high-risk population of stroke as the research object and discovering the risk factors of MCI as early as possible can prevent the occurrence of MCI more effectively. METHODS: The Boruta algorithm was used to screen variables, and eight machine learning models were established and evaluated. The best performing models were used to assess variable importance and build an online risk calculator. Shapley additive explanation is used to explain the model. RESULTS: A total of 199 patients were included in the study, 99 of whom were male. Transient ischemic attack (TIA), homocysteine, education, hematocrit (HCT), diabetes, hemoglobin, red blood cells (RBC), hypertension, prothrombin time (PT) were selected by Boruta algorithm. Logistic regression (AUC = 0.8595) was the best model for predicting MCI in high-risk groups of stroke, followed by elastic network (ENET) (AUC = 0.8312), multilayer perceptron (MLP) (AUC = 0.7908), extreme gradient boosting (XGBoost) (AUC = 0.7691), and support vector machine (SVM) (AUC = 0.7527), random forest (RF) (AUC = 0.7451), K-nearest neighbors (KNN) (AUC = 0.7380), decision tree (DT) (AUC = 0.6972). The importance of variables suggests that TIA, diabetes, education, and hypertension are the top four variables of importance. CONCLUSION: Transient ischemic attack (TIA), diabetes, education, and hypertension are the most important risk factors for MCI in high-risk groups of stroke, and early intervention should be performed to reduce the occurrence of MCI. Frontiers Media S.A. 2023-06-15 /pmc/articles/PMC10308219/ /pubmed/37396650 http://dx.doi.org/10.3389/fnagi.2023.1180351 Text en Copyright © 2023 Yan, Chen, Quan, Wang, Wei and Zhu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Yan, Feng-Juan Chen, Xie-Hui Quan, Xiao-Qing Wang, Li-Li Wei, Xin-Yi Zhu, Jia-Liang Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title | Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title_full | Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title_fullStr | Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title_full_unstemmed | Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title_short | Development and validation of an interpretable machine learning model—Predicting mild cognitive impairment in a high-risk stroke population |
title_sort | development and validation of an interpretable machine learning model—predicting mild cognitive impairment in a high-risk stroke population |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10308219/ https://www.ncbi.nlm.nih.gov/pubmed/37396650 http://dx.doi.org/10.3389/fnagi.2023.1180351 |
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