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Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods
PURPOSE: Image quality in accelerated MRI rests on careful selection of various reconstruction parameters. A common yet tedious and error-prone practice is to hand-tune each parameter to attain visually appealing reconstructions. Here, we propose a parameter tuning strategy to automate hybrid parall...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311279/ https://www.ncbi.nlm.nih.gov/pubmed/35216887 http://dx.doi.org/10.1016/j.zemedi.2022.02.002 |
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author | Ilicak, Efe Saritas, Emine Ulku Çukur, Tolga |
author_facet | Ilicak, Efe Saritas, Emine Ulku Çukur, Tolga |
author_sort | Ilicak, Efe |
collection | PubMed |
description | PURPOSE: Image quality in accelerated MRI rests on careful selection of various reconstruction parameters. A common yet tedious and error-prone practice is to hand-tune each parameter to attain visually appealing reconstructions. Here, we propose a parameter tuning strategy to automate hybrid parallel imaging (PI) – compressed sensing (CS) reconstructions via low-rank modeling of local k-space neighborhoods (LORAKS) supplemented with sparsity regularization in wavelet and total variation (TV) domains. METHODS: For low-rank regularization, we leverage a soft-thresholding operation based on singular values for matrix rank selection in LORAKS. For sparsity regularization, we employ Stein's unbiased risk estimate criterion to select the wavelet regularization parameter and local standard deviation of reconstructions to select the TV regularization parameter. Comprehensive demonstrations are presented on a numerical brain phantom and in vivo brain and knee acquisitions. Quantitative assessments are performed via PSNR, SSIM and NMSE metrics. RESULTS: The proposed hybrid PI-CS method improves reconstruction quality compared to PI-only techniques, and it achieves on par image quality to reconstructions with brute-force optimization of reconstruction parameters. These results are prominent across several different datasets and the range of examined acceleration rates. CONCLUSION: A data-driven parameter tuning strategy to automate hybrid PI-CS reconstructions is presented. The proposed method achieves reliable reconstructions of accelerated multi-coil MRI datasets without the need for exhaustive hand-tuning of reconstruction parameters. |
format | Online Article Text |
id | pubmed-10311279 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-103112792023-07-01 Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods Ilicak, Efe Saritas, Emine Ulku Çukur, Tolga Z Med Phys Original Paper PURPOSE: Image quality in accelerated MRI rests on careful selection of various reconstruction parameters. A common yet tedious and error-prone practice is to hand-tune each parameter to attain visually appealing reconstructions. Here, we propose a parameter tuning strategy to automate hybrid parallel imaging (PI) – compressed sensing (CS) reconstructions via low-rank modeling of local k-space neighborhoods (LORAKS) supplemented with sparsity regularization in wavelet and total variation (TV) domains. METHODS: For low-rank regularization, we leverage a soft-thresholding operation based on singular values for matrix rank selection in LORAKS. For sparsity regularization, we employ Stein's unbiased risk estimate criterion to select the wavelet regularization parameter and local standard deviation of reconstructions to select the TV regularization parameter. Comprehensive demonstrations are presented on a numerical brain phantom and in vivo brain and knee acquisitions. Quantitative assessments are performed via PSNR, SSIM and NMSE metrics. RESULTS: The proposed hybrid PI-CS method improves reconstruction quality compared to PI-only techniques, and it achieves on par image quality to reconstructions with brute-force optimization of reconstruction parameters. These results are prominent across several different datasets and the range of examined acceleration rates. CONCLUSION: A data-driven parameter tuning strategy to automate hybrid PI-CS reconstructions is presented. The proposed method achieves reliable reconstructions of accelerated multi-coil MRI datasets without the need for exhaustive hand-tuning of reconstruction parameters. Elsevier 2022-02-22 /pmc/articles/PMC10311279/ /pubmed/35216887 http://dx.doi.org/10.1016/j.zemedi.2022.02.002 Text en © 2022 Published by Elsevier GmbH on behalf of DGMP, ÖGMP and SSRMP. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Paper Ilicak, Efe Saritas, Emine Ulku Çukur, Tolga Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title | Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title_full | Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title_fullStr | Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title_full_unstemmed | Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title_short | Automated Parameter Selection for Accelerated MRI Reconstruction via Low-Rank Modeling of Local k-Space Neighborhoods |
title_sort | automated parameter selection for accelerated mri reconstruction via low-rank modeling of local k-space neighborhoods |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311279/ https://www.ncbi.nlm.nih.gov/pubmed/35216887 http://dx.doi.org/10.1016/j.zemedi.2022.02.002 |
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