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PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer

MOTIVATION: As viruses that mainly infect bacteria, phages are key players across a wide range of ecosystems. Analyzing phage proteins is indispensable for understanding phages’ functions and roles in microbiomes. High-throughput sequencing enables us to obtain phages in different microbiomes with l...

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Detalles Bibliográficos
Autores principales:	Shang, Jiayu, Peng, Cheng, Tang, Xubo, Sun, Yanni
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	Bioinformatics of Microbes and Microbiomes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311294/ https://www.ncbi.nlm.nih.gov/pubmed/37387136 http://dx.doi.org/10.1093/bioinformatics/btad229

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