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Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation

[Image: see text] The Wood–Ljungdahl Pathway is a unique biological mechanism of carbon dioxide and carbon monoxide fixation proposed to operate through nickel-based organometallic intermediates. The most unusual steps in this metabolic cycle involve a complex of two distinct nickel–iron–sulfur prot...

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Autores principales: Can, Mehmet, Abernathy, Macon J., Wiley, Seth, Griffith, Claire, James, Christopher D., Xiong, Jin, Guo, Yisong, Hoffman, Brian M., Ragsdale, Stephen W., Sarangi, Ritimukta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311460/
https://www.ncbi.nlm.nih.gov/pubmed/37306669
http://dx.doi.org/10.1021/jacs.3c01772
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author Can, Mehmet
Abernathy, Macon J.
Wiley, Seth
Griffith, Claire
James, Christopher D.
Xiong, Jin
Guo, Yisong
Hoffman, Brian M.
Ragsdale, Stephen W.
Sarangi, Ritimukta
author_facet Can, Mehmet
Abernathy, Macon J.
Wiley, Seth
Griffith, Claire
James, Christopher D.
Xiong, Jin
Guo, Yisong
Hoffman, Brian M.
Ragsdale, Stephen W.
Sarangi, Ritimukta
author_sort Can, Mehmet
collection PubMed
description [Image: see text] The Wood–Ljungdahl Pathway is a unique biological mechanism of carbon dioxide and carbon monoxide fixation proposed to operate through nickel-based organometallic intermediates. The most unusual steps in this metabolic cycle involve a complex of two distinct nickel–iron–sulfur proteins: CO dehydrogenase and acetyl-CoA synthase (CODH/ACS). Here, we describe the nickel-methyl and nickel-acetyl intermediates in ACS completing the characterization of all its proposed organometallic intermediates. A single nickel site (Ni(p)) within the A cluster of ACS undergoes major geometric and redox changes as it transits the planar Ni(p), tetrahedral Ni(p)–CO and planar Ni(p)–Me and Ni(p)–Ac intermediates. We propose that the Ni(p) intermediates equilibrate among different redox states, driven by an electrochemical–chemical (EC) coupling process, and that geometric changes in the A-cluster linked to large protein conformational changes control entry of CO and the methyl group.
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spelling pubmed-103114602023-07-01 Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation Can, Mehmet Abernathy, Macon J. Wiley, Seth Griffith, Claire James, Christopher D. Xiong, Jin Guo, Yisong Hoffman, Brian M. Ragsdale, Stephen W. Sarangi, Ritimukta J Am Chem Soc [Image: see text] The Wood–Ljungdahl Pathway is a unique biological mechanism of carbon dioxide and carbon monoxide fixation proposed to operate through nickel-based organometallic intermediates. The most unusual steps in this metabolic cycle involve a complex of two distinct nickel–iron–sulfur proteins: CO dehydrogenase and acetyl-CoA synthase (CODH/ACS). Here, we describe the nickel-methyl and nickel-acetyl intermediates in ACS completing the characterization of all its proposed organometallic intermediates. A single nickel site (Ni(p)) within the A cluster of ACS undergoes major geometric and redox changes as it transits the planar Ni(p), tetrahedral Ni(p)–CO and planar Ni(p)–Me and Ni(p)–Ac intermediates. We propose that the Ni(p) intermediates equilibrate among different redox states, driven by an electrochemical–chemical (EC) coupling process, and that geometric changes in the A-cluster linked to large protein conformational changes control entry of CO and the methyl group. American Chemical Society 2023-06-12 /pmc/articles/PMC10311460/ /pubmed/37306669 http://dx.doi.org/10.1021/jacs.3c01772 Text en © 2023 American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Can, Mehmet
Abernathy, Macon J.
Wiley, Seth
Griffith, Claire
James, Christopher D.
Xiong, Jin
Guo, Yisong
Hoffman, Brian M.
Ragsdale, Stephen W.
Sarangi, Ritimukta
Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title_full Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title_fullStr Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title_full_unstemmed Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title_short Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO(2) and CO Fixation
title_sort characterization of methyl- and acetyl-ni intermediates in acetyl coa synthase formed during anaerobic co(2) and co fixation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311460/
https://www.ncbi.nlm.nih.gov/pubmed/37306669
http://dx.doi.org/10.1021/jacs.3c01772
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