Cargando…

Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review

Pharmacogenomics (PGx) aims at tailoring drug therapy by considering patient genetic makeup. While drug dosage guidelines have been extensively based on single gene mutations (single nucleotide polymorphisms) over the last decade, polygenic risk scores (PRS) have emerged in the past years as a promi...

Descripción completa

Detalles Bibliográficos
Autores principales: Simona, Aurélien, Song, Wenyu, Bates, David W., Samer, Caroline Flora
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311496/
https://www.ncbi.nlm.nih.gov/pubmed/37396043
http://dx.doi.org/10.3389/fgene.2023.1217049
_version_ 1785066753267597312
author Simona, Aurélien
Song, Wenyu
Bates, David W.
Samer, Caroline Flora
author_facet Simona, Aurélien
Song, Wenyu
Bates, David W.
Samer, Caroline Flora
author_sort Simona, Aurélien
collection PubMed
description Pharmacogenomics (PGx) aims at tailoring drug therapy by considering patient genetic makeup. While drug dosage guidelines have been extensively based on single gene mutations (single nucleotide polymorphisms) over the last decade, polygenic risk scores (PRS) have emerged in the past years as a promising tool to account for the complex interplay and polygenic nature of patients’ genetic predisposition affecting drug response. Even though PRS research has demonstrated convincing evidence in disease risk prediction, the clinical utility and its implementation in daily care has yet to be demonstrated, and pharmacogenomics is no exception; usual endpoints include drug efficacy or toxicity. Here, we review the general pipeline in PRS calculation, and we discuss some of the remaining barriers and challenges that must be undertaken to bring PRS research in PGx closer to patient care. Besides the need in following reporting guidelines and larger PGx patient cohorts, PRS integration will require close collaboration between bioinformatician, treating physicians and genetic consultants to ensure a transparent, generalizable, and trustful implementation of PRS results in real-world medical decisions.
format Online
Article
Text
id pubmed-10311496
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-103114962023-07-01 Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review Simona, Aurélien Song, Wenyu Bates, David W. Samer, Caroline Flora Front Genet Genetics Pharmacogenomics (PGx) aims at tailoring drug therapy by considering patient genetic makeup. While drug dosage guidelines have been extensively based on single gene mutations (single nucleotide polymorphisms) over the last decade, polygenic risk scores (PRS) have emerged in the past years as a promising tool to account for the complex interplay and polygenic nature of patients’ genetic predisposition affecting drug response. Even though PRS research has demonstrated convincing evidence in disease risk prediction, the clinical utility and its implementation in daily care has yet to be demonstrated, and pharmacogenomics is no exception; usual endpoints include drug efficacy or toxicity. Here, we review the general pipeline in PRS calculation, and we discuss some of the remaining barriers and challenges that must be undertaken to bring PRS research in PGx closer to patient care. Besides the need in following reporting guidelines and larger PGx patient cohorts, PRS integration will require close collaboration between bioinformatician, treating physicians and genetic consultants to ensure a transparent, generalizable, and trustful implementation of PRS results in real-world medical decisions. Frontiers Media S.A. 2023-06-15 /pmc/articles/PMC10311496/ /pubmed/37396043 http://dx.doi.org/10.3389/fgene.2023.1217049 Text en Copyright © 2023 Simona, Song, Bates and Samer. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Simona, Aurélien
Song, Wenyu
Bates, David W.
Samer, Caroline Flora
Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title_full Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title_fullStr Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title_full_unstemmed Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title_short Polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
title_sort polygenic risk scores in pharmacogenomics: opportunities and challenges—a mini review
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10311496/
https://www.ncbi.nlm.nih.gov/pubmed/37396043
http://dx.doi.org/10.3389/fgene.2023.1217049
work_keys_str_mv AT simonaaurelien polygenicriskscoresinpharmacogenomicsopportunitiesandchallengesaminireview
AT songwenyu polygenicriskscoresinpharmacogenomicsopportunitiesandchallengesaminireview
AT batesdavidw polygenicriskscoresinpharmacogenomicsopportunitiesandchallengesaminireview
AT samercarolineflora polygenicriskscoresinpharmacogenomicsopportunitiesandchallengesaminireview