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The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus

The complete mitochondrial genome (mitogenome) of the leafhopper Atkinsoniella nigrita Zhang & Kuoh, 1993 was determined in this study. The entire sequence was 16,011 base pairs (bp) in length. The new mitogenome consists of a typical set of genes: 13 protein-coding genes (PCGs), two ribosomal R...

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Autores principales: Li, Hu, Yu, Kai, Zhao, Rui, Wu, Gang, Xiong, Chuan-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10312024/
https://www.ncbi.nlm.nih.gov/pubmed/37396095
http://dx.doi.org/10.1080/23802359.2023.2228932
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author Li, Hu
Yu, Kai
Zhao, Rui
Wu, Gang
Xiong, Chuan-Feng
author_facet Li, Hu
Yu, Kai
Zhao, Rui
Wu, Gang
Xiong, Chuan-Feng
author_sort Li, Hu
collection PubMed
description The complete mitochondrial genome (mitogenome) of the leafhopper Atkinsoniella nigrita Zhang & Kuoh, 1993 was determined in this study. The entire sequence was 16,011 base pairs (bp) in length. The new mitogenome consists of a typical set of genes: 13 protein-coding genes (PCGs), two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and one control region of 1720 bp in length. The base composition of the mitogenome was A = 41.7%, T = 38.2%, C = 10.7%, and G = 9.4%. This is the classical structure for most insect mitogenomes without any gene arrangement observed. Compared with other known mitochondrial genomes of 15 Atkinsoniella species, the new mitogenome with three PCGs (ND2, ND5, and ND4L) shared the same gene base length, start codon and stop codon, and the shortest 12S rRNA (729 bp) and the longest tRNA-Lys (73 bp) within the genus Atkinsoniella. A phylogenetic analysis of 31 Cicadellinae and two Ledrinae concatenated sequences of 13 PCGs of their mitogenomes using Bayesian inference (BI) revealed that A. nigrita belongs to the genus Atkinsoniella with strong nodal support (BI posterior probability = 1).
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spelling pubmed-103120242023-07-01 The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus Li, Hu Yu, Kai Zhao, Rui Wu, Gang Xiong, Chuan-Feng Mitochondrial DNA B Resour Plastome Reports The complete mitochondrial genome (mitogenome) of the leafhopper Atkinsoniella nigrita Zhang & Kuoh, 1993 was determined in this study. The entire sequence was 16,011 base pairs (bp) in length. The new mitogenome consists of a typical set of genes: 13 protein-coding genes (PCGs), two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and one control region of 1720 bp in length. The base composition of the mitogenome was A = 41.7%, T = 38.2%, C = 10.7%, and G = 9.4%. This is the classical structure for most insect mitogenomes without any gene arrangement observed. Compared with other known mitochondrial genomes of 15 Atkinsoniella species, the new mitogenome with three PCGs (ND2, ND5, and ND4L) shared the same gene base length, start codon and stop codon, and the shortest 12S rRNA (729 bp) and the longest tRNA-Lys (73 bp) within the genus Atkinsoniella. A phylogenetic analysis of 31 Cicadellinae and two Ledrinae concatenated sequences of 13 PCGs of their mitogenomes using Bayesian inference (BI) revealed that A. nigrita belongs to the genus Atkinsoniella with strong nodal support (BI posterior probability = 1). Taylor & Francis 2023-06-29 /pmc/articles/PMC10312024/ /pubmed/37396095 http://dx.doi.org/10.1080/23802359.2023.2228932 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Plastome Reports
Li, Hu
Yu, Kai
Zhao, Rui
Wu, Gang
Xiong, Chuan-Feng
The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title_full The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title_fullStr The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title_full_unstemmed The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title_short The complete mitochondrial genome of leafhopper Atkinsoniella nigrita (Hemiptera: Cicadellidae) with the shortest 12S rRNA and longest tRNA-Lys of the Atkinsoniella genus
title_sort complete mitochondrial genome of leafhopper atkinsoniella nigrita (hemiptera: cicadellidae) with the shortest 12s rrna and longest trna-lys of the atkinsoniella genus
topic Plastome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10312024/
https://www.ncbi.nlm.nih.gov/pubmed/37396095
http://dx.doi.org/10.1080/23802359.2023.2228932
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