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Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer

BACKGROUND: Breast-conserving surgery is aimed at removing all cancerous cells while minimizing the loss of healthy tissue. To ensure a balance between complete resection of cancer and preservation of healthy tissue, it is necessary to assess themargins of the removed specimen during the operation....

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Autores principales: To, Tyrell, Lu, Tongtong, Jorns, Julie M., Patton, Mollie, Schmidt, Taly Gilat, Yen, Tina, Yu, Bing, Ye, Dong Hye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10313133/
https://www.ncbi.nlm.nih.gov/pubmed/37397361
http://dx.doi.org/10.3389/fonc.2023.1179025
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author To, Tyrell
Lu, Tongtong
Jorns, Julie M.
Patton, Mollie
Schmidt, Taly Gilat
Yen, Tina
Yu, Bing
Ye, Dong Hye
author_facet To, Tyrell
Lu, Tongtong
Jorns, Julie M.
Patton, Mollie
Schmidt, Taly Gilat
Yen, Tina
Yu, Bing
Ye, Dong Hye
author_sort To, Tyrell
collection PubMed
description BACKGROUND: Breast-conserving surgery is aimed at removing all cancerous cells while minimizing the loss of healthy tissue. To ensure a balance between complete resection of cancer and preservation of healthy tissue, it is necessary to assess themargins of the removed specimen during the operation. Deep ultraviolet (DUV) fluorescence scanning microscopy provides rapid whole-surface imaging (WSI) of resected tissues with significant contrast between malignant and normal/benign tissue. Intra-operative margin assessment with DUV images would benefit from an automated breast cancer classification method. METHODS: Deep learning has shown promising results in breast cancer classification, but the limited DUV image dataset presents the challenge of overfitting to train a robust network. To overcome this challenge, the DUV-WSI images are split into small patches, and features are extracted using a pre-trained convolutional neural network—afterward, a gradient-boosting tree trains on these features for patch-level classification. An ensemble learning approach merges patch-level classification results and regional importance to determine the margin status. An explainable artificial intelligence method calculates the regional importance values. RESULTS: The proposed method’s ability to determine the DUV WSI was high with 95% accuracy. The 100% sensitivity shows that the method can detect malignant cases efficiently. The method could also accurately localize areas that contain malignant or normal/benign tissue. CONCLUSION: The proposed method outperforms the standard deep learning classification methods on the DUV breast surgical samples. The results suggest that it can be used to improve classification performance and identify cancerous regions more effectively.
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spelling pubmed-103131332023-07-01 Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer To, Tyrell Lu, Tongtong Jorns, Julie M. Patton, Mollie Schmidt, Taly Gilat Yen, Tina Yu, Bing Ye, Dong Hye Front Oncol Oncology BACKGROUND: Breast-conserving surgery is aimed at removing all cancerous cells while minimizing the loss of healthy tissue. To ensure a balance between complete resection of cancer and preservation of healthy tissue, it is necessary to assess themargins of the removed specimen during the operation. Deep ultraviolet (DUV) fluorescence scanning microscopy provides rapid whole-surface imaging (WSI) of resected tissues with significant contrast between malignant and normal/benign tissue. Intra-operative margin assessment with DUV images would benefit from an automated breast cancer classification method. METHODS: Deep learning has shown promising results in breast cancer classification, but the limited DUV image dataset presents the challenge of overfitting to train a robust network. To overcome this challenge, the DUV-WSI images are split into small patches, and features are extracted using a pre-trained convolutional neural network—afterward, a gradient-boosting tree trains on these features for patch-level classification. An ensemble learning approach merges patch-level classification results and regional importance to determine the margin status. An explainable artificial intelligence method calculates the regional importance values. RESULTS: The proposed method’s ability to determine the DUV WSI was high with 95% accuracy. The 100% sensitivity shows that the method can detect malignant cases efficiently. The method could also accurately localize areas that contain malignant or normal/benign tissue. CONCLUSION: The proposed method outperforms the standard deep learning classification methods on the DUV breast surgical samples. The results suggest that it can be used to improve classification performance and identify cancerous regions more effectively. Frontiers Media S.A. 2023-06-16 /pmc/articles/PMC10313133/ /pubmed/37397361 http://dx.doi.org/10.3389/fonc.2023.1179025 Text en Copyright © 2023 To, Lu, Jorns, Patton, Schmidt, Yen, Yu and Ye https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
To, Tyrell
Lu, Tongtong
Jorns, Julie M.
Patton, Mollie
Schmidt, Taly Gilat
Yen, Tina
Yu, Bing
Ye, Dong Hye
Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title_full Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title_fullStr Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title_full_unstemmed Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title_short Deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
title_sort deep learning classification of deep ultraviolet fluorescence images toward intra-operative margin assessment in breast cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10313133/
https://www.ncbi.nlm.nih.gov/pubmed/37397361
http://dx.doi.org/10.3389/fonc.2023.1179025
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