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Are the [6]-coordinated sites in tourmaline in certain cases partially vacant?
Tourmaline has two different [6]-coordinated sites, the Y site and the Z site. Vacancies were reported from both sites. Based on high-quality chemical and single-crystal structural data it usually needs increasing proportions of short-range order configurations Na(Al(2)□)Al(6)(BO(3))(3)[Si(6)O(18)](...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Vienna
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10313569/ https://www.ncbi.nlm.nih.gov/pubmed/37396844 http://dx.doi.org/10.1007/s00710-023-00815-4 |
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author | Ertl, Andreas |
author_facet | Ertl, Andreas |
author_sort | Ertl, Andreas |
collection | PubMed |
description | Tourmaline has two different [6]-coordinated sites, the Y site and the Z site. Vacancies were reported from both sites. Based on high-quality chemical and single-crystal structural data it usually needs increasing proportions of short-range order configurations Na(Al(2)□)Al(6)(BO(3))(3)[Si(6)O(18)](V)(OH)(3)(W)(OH) or Na(Al(2)□)Al(6)(BO(3))(3)[Si(6)O(18)](V)(OH)(3)(W)F in order to produce Y-site vacancies (with □ being the symbol for a vacant site). Less commonly, the short-range configuration Ca(Al(2)□)Al(6)(BO(3))(3)[Si(5)T(3+)O(18)](V)(OH)(3)(W)(OH) could occur in Al-rich tourmalines with a Si deficiency, where T(3+) = B, Al. Therefore, tourmalines enriched in cations with charge 2 + (Fe(2+), Mn(2+), Mg) contain only insignificant Y-site vacancies. Aluminum-rich tourmalines with ≥ 7.0 apfu Al(total) that usually contain ≥ 0.2 apfu Li may have significant vacancies at the Y site. However, no more than 12% vacancies (0.36 pfu) at the Y site can be observed in such samples. If no chemical data for Li is available it is proposed to calculate the Li content in such colourless or coloured tourmalines (elbaite, fluor-elbaite, fluor-liddicoatite, rossmanite) for Y = 2.8 apfu or for Y + Z + T = 14.8 apfu, because this calculation should give more accurate results than calculating the Li content as the difference to 3.0 apfu at the Y site. For Fe(2+)-rich and Mg-bearing tourmalines from the schorl-dravite series with MgO > 1.0 wt% (and only minor amounts of Fe(3+), Cr(3+) and V(3+)) the structural formula can still be calculated for Y + Z + T = 15 apfu, because such tourmalines do not appear to contain significant Y-site vacancies. It can further be concluded that the Z site could be only ≤ 1% vacant and therefore such vacancies would be insignificant even in Al-rich tourmaline. |
format | Online Article Text |
id | pubmed-10313569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-103135692023-07-02 Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? Ertl, Andreas Mineral Petrol Research Tourmaline has two different [6]-coordinated sites, the Y site and the Z site. Vacancies were reported from both sites. Based on high-quality chemical and single-crystal structural data it usually needs increasing proportions of short-range order configurations Na(Al(2)□)Al(6)(BO(3))(3)[Si(6)O(18)](V)(OH)(3)(W)(OH) or Na(Al(2)□)Al(6)(BO(3))(3)[Si(6)O(18)](V)(OH)(3)(W)F in order to produce Y-site vacancies (with □ being the symbol for a vacant site). Less commonly, the short-range configuration Ca(Al(2)□)Al(6)(BO(3))(3)[Si(5)T(3+)O(18)](V)(OH)(3)(W)(OH) could occur in Al-rich tourmalines with a Si deficiency, where T(3+) = B, Al. Therefore, tourmalines enriched in cations with charge 2 + (Fe(2+), Mn(2+), Mg) contain only insignificant Y-site vacancies. Aluminum-rich tourmalines with ≥ 7.0 apfu Al(total) that usually contain ≥ 0.2 apfu Li may have significant vacancies at the Y site. However, no more than 12% vacancies (0.36 pfu) at the Y site can be observed in such samples. If no chemical data for Li is available it is proposed to calculate the Li content in such colourless or coloured tourmalines (elbaite, fluor-elbaite, fluor-liddicoatite, rossmanite) for Y = 2.8 apfu or for Y + Z + T = 14.8 apfu, because this calculation should give more accurate results than calculating the Li content as the difference to 3.0 apfu at the Y site. For Fe(2+)-rich and Mg-bearing tourmalines from the schorl-dravite series with MgO > 1.0 wt% (and only minor amounts of Fe(3+), Cr(3+) and V(3+)) the structural formula can still be calculated for Y + Z + T = 15 apfu, because such tourmalines do not appear to contain significant Y-site vacancies. It can further be concluded that the Z site could be only ≤ 1% vacant and therefore such vacancies would be insignificant even in Al-rich tourmaline. Springer Vienna 2023-02-22 2023 /pmc/articles/PMC10313569/ /pubmed/37396844 http://dx.doi.org/10.1007/s00710-023-00815-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Ertl, Andreas Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title | Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title_full | Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title_fullStr | Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title_full_unstemmed | Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title_short | Are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
title_sort | are the [6]-coordinated sites in tourmaline in certain cases partially vacant? |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10313569/ https://www.ncbi.nlm.nih.gov/pubmed/37396844 http://dx.doi.org/10.1007/s00710-023-00815-4 |
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