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Epigenome‐wide DNA methylation analysis of myasthenia gravis

Myasthenia gravis (MG) is a common neuromuscular junction disorder and autoimmune disease mediated by several antibodies. Several studies have shown that genetic factors play an important role in MG pathogenesis. To gain insight into the epigenetic factors affecting MG, we report here genome‐scale D...

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Autores principales: Lin, Jingjing, Tao, Linshuang, Deng, Lu, Zhou, Ruyi, Lou, Shuyue, Chen, Songfang, Chen, Xuanyu, Lu, Chunxing, Li, Peijun, Hu, Beilei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315801/
https://www.ncbi.nlm.nih.gov/pubmed/37254650
http://dx.doi.org/10.1002/2211-5463.13656
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author Lin, Jingjing
Tao, Linshuang
Deng, Lu
Zhou, Ruyi
Lou, Shuyue
Chen, Songfang
Chen, Xuanyu
Lu, Chunxing
Li, Peijun
Hu, Beilei
author_facet Lin, Jingjing
Tao, Linshuang
Deng, Lu
Zhou, Ruyi
Lou, Shuyue
Chen, Songfang
Chen, Xuanyu
Lu, Chunxing
Li, Peijun
Hu, Beilei
author_sort Lin, Jingjing
collection PubMed
description Myasthenia gravis (MG) is a common neuromuscular junction disorder and autoimmune disease mediated by several antibodies. Several studies have shown that genetic factors play an important role in MG pathogenesis. To gain insight into the epigenetic factors affecting MG, we report here genome‐scale DNA methylation profiles of MG. DNA was extracted from eight MG patients and four healthy controls for genome‐wide DNA methylation analysis using the Illumina HumanMethylation 850K BeadChip. Verification of pyrosequencing was conducted based on differential methylation positions. Subsequently, C2C12 and HT22 cell lines (derived from mouse) were treated with demethylation drugs. Transcribed mRNA of the screened differential genes was detected using quantitative real‐time PCR. The control and MG group were compared, and two key probe positions were selected. The corresponding genes were CAMK1D and CREB5 (P < 0.05). Similarly, the myasthenic crisis (MC) and non‐MC group were compared and four key probe positions were selected. The corresponding genes were SAV1, STK3, YAP1, and WWTR1 (P < 0.05). Subsequently, pyrosequencing was performed for verification, revealing that hypomethylation of CAMK1D was significantly different between the MG and control group (P < 0.001). Moreover, transcription of CREB5, PKD, YAP1, and STK3 genes in the C2C12 cells was downregulated (P < 0.05) after drug treatment, but only YAP1 mRNA was downregulated in HT22 cells (P < 0.05). This is the first study to investigate genome‐scale DNA methylation profiles of MG using 850 K BeadChip. The identified molecular markers of methylation may aid in the prevention, diagnosis, treatment, and prognosis of MG.
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spelling pubmed-103158012023-07-04 Epigenome‐wide DNA methylation analysis of myasthenia gravis Lin, Jingjing Tao, Linshuang Deng, Lu Zhou, Ruyi Lou, Shuyue Chen, Songfang Chen, Xuanyu Lu, Chunxing Li, Peijun Hu, Beilei FEBS Open Bio Research Articles Myasthenia gravis (MG) is a common neuromuscular junction disorder and autoimmune disease mediated by several antibodies. Several studies have shown that genetic factors play an important role in MG pathogenesis. To gain insight into the epigenetic factors affecting MG, we report here genome‐scale DNA methylation profiles of MG. DNA was extracted from eight MG patients and four healthy controls for genome‐wide DNA methylation analysis using the Illumina HumanMethylation 850K BeadChip. Verification of pyrosequencing was conducted based on differential methylation positions. Subsequently, C2C12 and HT22 cell lines (derived from mouse) were treated with demethylation drugs. Transcribed mRNA of the screened differential genes was detected using quantitative real‐time PCR. The control and MG group were compared, and two key probe positions were selected. The corresponding genes were CAMK1D and CREB5 (P < 0.05). Similarly, the myasthenic crisis (MC) and non‐MC group were compared and four key probe positions were selected. The corresponding genes were SAV1, STK3, YAP1, and WWTR1 (P < 0.05). Subsequently, pyrosequencing was performed for verification, revealing that hypomethylation of CAMK1D was significantly different between the MG and control group (P < 0.001). Moreover, transcription of CREB5, PKD, YAP1, and STK3 genes in the C2C12 cells was downregulated (P < 0.05) after drug treatment, but only YAP1 mRNA was downregulated in HT22 cells (P < 0.05). This is the first study to investigate genome‐scale DNA methylation profiles of MG using 850 K BeadChip. The identified molecular markers of methylation may aid in the prevention, diagnosis, treatment, and prognosis of MG. John Wiley and Sons Inc. 2023-06-10 /pmc/articles/PMC10315801/ /pubmed/37254650 http://dx.doi.org/10.1002/2211-5463.13656 Text en © 2023 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Lin, Jingjing
Tao, Linshuang
Deng, Lu
Zhou, Ruyi
Lou, Shuyue
Chen, Songfang
Chen, Xuanyu
Lu, Chunxing
Li, Peijun
Hu, Beilei
Epigenome‐wide DNA methylation analysis of myasthenia gravis
title Epigenome‐wide DNA methylation analysis of myasthenia gravis
title_full Epigenome‐wide DNA methylation analysis of myasthenia gravis
title_fullStr Epigenome‐wide DNA methylation analysis of myasthenia gravis
title_full_unstemmed Epigenome‐wide DNA methylation analysis of myasthenia gravis
title_short Epigenome‐wide DNA methylation analysis of myasthenia gravis
title_sort epigenome‐wide dna methylation analysis of myasthenia gravis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315801/
https://www.ncbi.nlm.nih.gov/pubmed/37254650
http://dx.doi.org/10.1002/2211-5463.13656
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