Cargando…

Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning

BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable...

Descripción completa

Detalles Bibliográficos
Autores principales: Küçükakçali, Zeynep, Akbulut, Sami, Çolak, Cemil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Kare Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315941/
https://www.ncbi.nlm.nih.gov/pubmed/37278078
http://dx.doi.org/10.14744/tjtes.2023.10001
_version_ 1785067609940557824
author Küçükakçali, Zeynep
Akbulut, Sami
Çolak, Cemil
author_facet Küçükakçali, Zeynep
Akbulut, Sami
Çolak, Cemil
author_sort Küçükakçali, Zeynep
collection PubMed
description BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable importance. METHODS: An open-access dataset comparing two patient groups with (n=40) and without (n=44) AAp to predict biomarkers for AAp was used for this case−control study. RF was used for modeling the data set. The data were divided into two training and test dataset (80:20). Accuracy, balanced accuracy (BC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) performance metrics were appraised for model performance. RESULTS: Accuracy, BC, sensitivity, specificity, PPV, NPV, and F1 scores pertaining to the RF model were 93.8%, 93.8%, 87.5%, 100%, 100%, 88.9%, and 93.3%, respectively. Following the variable importance values regarding the model, the variables most associated with the diagnosis and prediction of AAp were fecal calprotectin (100 %), radiological imaging (89.9%), white blood test (51.8%), C-reactive protein (47.1%), from symptoms onset to the hospital visit (19.3%), patients age (18.4%), alanine aminotransferase levels >40 (<1%), fever (<1%), and nausea/vomiting (<1%), respectively. CONCLUSION: A prediction model was developed for AAp with the ML method in this study. Thanks to this model, biomarkers that predict AAp with high accuracy were determined. Thus, the decision-making process of clinicians for diagnosing AAp will be facilitated, and the risks of perforation and unnecessary operations will be minimized thanks to the timely diagnosis with high accuracy.
format Online
Article
Text
id pubmed-10315941
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Kare Publishing
record_format MEDLINE/PubMed
spelling pubmed-103159412023-07-04 Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning Küçükakçali, Zeynep Akbulut, Sami Çolak, Cemil Ulus Travma Acil Cerrahi Derg Original Article BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable importance. METHODS: An open-access dataset comparing two patient groups with (n=40) and without (n=44) AAp to predict biomarkers for AAp was used for this case−control study. RF was used for modeling the data set. The data were divided into two training and test dataset (80:20). Accuracy, balanced accuracy (BC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) performance metrics were appraised for model performance. RESULTS: Accuracy, BC, sensitivity, specificity, PPV, NPV, and F1 scores pertaining to the RF model were 93.8%, 93.8%, 87.5%, 100%, 100%, 88.9%, and 93.3%, respectively. Following the variable importance values regarding the model, the variables most associated with the diagnosis and prediction of AAp were fecal calprotectin (100 %), radiological imaging (89.9%), white blood test (51.8%), C-reactive protein (47.1%), from symptoms onset to the hospital visit (19.3%), patients age (18.4%), alanine aminotransferase levels >40 (<1%), fever (<1%), and nausea/vomiting (<1%), respectively. CONCLUSION: A prediction model was developed for AAp with the ML method in this study. Thanks to this model, biomarkers that predict AAp with high accuracy were determined. Thus, the decision-making process of clinicians for diagnosing AAp will be facilitated, and the risks of perforation and unnecessary operations will be minimized thanks to the timely diagnosis with high accuracy. Kare Publishing 2023-06-05 /pmc/articles/PMC10315941/ /pubmed/37278078 http://dx.doi.org/10.14744/tjtes.2023.10001 Text en Copyright © 2023 Turkish Journal of Trauma and Emergency Surgery https://creativecommons.org/licenses/by-nc/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License
spellingShingle Original Article
Küçükakçali, Zeynep
Akbulut, Sami
Çolak, Cemil
Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title_full Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title_fullStr Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title_full_unstemmed Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title_short Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
title_sort value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315941/
https://www.ncbi.nlm.nih.gov/pubmed/37278078
http://dx.doi.org/10.14744/tjtes.2023.10001
work_keys_str_mv AT kucukakcalizeynep valueoffecalcalprotectininpredictionofacuteappendicitisbasedonaproposedmodelofmachinelearning
AT akbulutsami valueoffecalcalprotectininpredictionofacuteappendicitisbasedonaproposedmodelofmachinelearning
AT colakcemil valueoffecalcalprotectininpredictionofacuteappendicitisbasedonaproposedmodelofmachinelearning