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Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning
BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Kare Publishing
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315941/ https://www.ncbi.nlm.nih.gov/pubmed/37278078 http://dx.doi.org/10.14744/tjtes.2023.10001 |
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author | Küçükakçali, Zeynep Akbulut, Sami Çolak, Cemil |
author_facet | Küçükakçali, Zeynep Akbulut, Sami Çolak, Cemil |
author_sort | Küçükakçali, Zeynep |
collection | PubMed |
description | BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable importance. METHODS: An open-access dataset comparing two patient groups with (n=40) and without (n=44) AAp to predict biomarkers for AAp was used for this case−control study. RF was used for modeling the data set. The data were divided into two training and test dataset (80:20). Accuracy, balanced accuracy (BC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) performance metrics were appraised for model performance. RESULTS: Accuracy, BC, sensitivity, specificity, PPV, NPV, and F1 scores pertaining to the RF model were 93.8%, 93.8%, 87.5%, 100%, 100%, 88.9%, and 93.3%, respectively. Following the variable importance values regarding the model, the variables most associated with the diagnosis and prediction of AAp were fecal calprotectin (100 %), radiological imaging (89.9%), white blood test (51.8%), C-reactive protein (47.1%), from symptoms onset to the hospital visit (19.3%), patients age (18.4%), alanine aminotransferase levels >40 (<1%), fever (<1%), and nausea/vomiting (<1%), respectively. CONCLUSION: A prediction model was developed for AAp with the ML method in this study. Thanks to this model, biomarkers that predict AAp with high accuracy were determined. Thus, the decision-making process of clinicians for diagnosing AAp will be facilitated, and the risks of perforation and unnecessary operations will be minimized thanks to the timely diagnosis with high accuracy. |
format | Online Article Text |
id | pubmed-10315941 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Kare Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-103159412023-07-04 Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning Küçükakçali, Zeynep Akbulut, Sami Çolak, Cemil Ulus Travma Acil Cerrahi Derg Original Article BACKGROUND: The aim of this study is to apply random forest (RF), one of the machine learning (ML) algorithms, to a dataset consisting of patients with a presumed diagnosis of acute appendicitis (AAp) and to reveal the most important factors associated with the diagnosis of AAp based on the variable importance. METHODS: An open-access dataset comparing two patient groups with (n=40) and without (n=44) AAp to predict biomarkers for AAp was used for this case−control study. RF was used for modeling the data set. The data were divided into two training and test dataset (80:20). Accuracy, balanced accuracy (BC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) performance metrics were appraised for model performance. RESULTS: Accuracy, BC, sensitivity, specificity, PPV, NPV, and F1 scores pertaining to the RF model were 93.8%, 93.8%, 87.5%, 100%, 100%, 88.9%, and 93.3%, respectively. Following the variable importance values regarding the model, the variables most associated with the diagnosis and prediction of AAp were fecal calprotectin (100 %), radiological imaging (89.9%), white blood test (51.8%), C-reactive protein (47.1%), from symptoms onset to the hospital visit (19.3%), patients age (18.4%), alanine aminotransferase levels >40 (<1%), fever (<1%), and nausea/vomiting (<1%), respectively. CONCLUSION: A prediction model was developed for AAp with the ML method in this study. Thanks to this model, biomarkers that predict AAp with high accuracy were determined. Thus, the decision-making process of clinicians for diagnosing AAp will be facilitated, and the risks of perforation and unnecessary operations will be minimized thanks to the timely diagnosis with high accuracy. Kare Publishing 2023-06-05 /pmc/articles/PMC10315941/ /pubmed/37278078 http://dx.doi.org/10.14744/tjtes.2023.10001 Text en Copyright © 2023 Turkish Journal of Trauma and Emergency Surgery https://creativecommons.org/licenses/by-nc/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License |
spellingShingle | Original Article Küçükakçali, Zeynep Akbulut, Sami Çolak, Cemil Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title | Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title_full | Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title_fullStr | Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title_full_unstemmed | Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title_short | Value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
title_sort | value of fecal calprotectin in prediction of acute appendicitis based on a proposed model of machine learning |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315941/ https://www.ncbi.nlm.nih.gov/pubmed/37278078 http://dx.doi.org/10.14744/tjtes.2023.10001 |
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