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Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
[Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-g...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10316403/ https://www.ncbi.nlm.nih.gov/pubmed/37334684 http://dx.doi.org/10.1021/acs.jpcb.3c00937 |
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author | Faulí, Bernat Durà Bianco, Valentino Franzese, Giancarlo |
author_facet | Faulí, Bernat Durà Bianco, Valentino Franzese, Giancarlo |
author_sort | Faulí, Bernat Durà |
collection | PubMed |
description | [Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-grained model incorporating water’s effects on the system’s free energy. Following previous studies, we modeled an unstructured protein as a polymer chain. Because we are interested in investigating how it responds to thermodynamic changes near a hydrophobic surface under different conditions, we chose an entirely hydrophobic sequence to maximize the interaction with the interface. We show that a slit pore confinement without top-down symmetry enhances the unfolding and adsorption of the chain in both random coil and globular states. Moreover, we demonstrate that the hydration water modulates this behavior depending on the thermodynamic parameters. Our findings provide insights into how homopolymers and possibly unstructured proteins can sense and adjust to external stimuli such as nanointerfaces or stresses. |
format | Online Article Text |
id | pubmed-10316403 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-103164032023-07-04 Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions Faulí, Bernat Durà Bianco, Valentino Franzese, Giancarlo J Phys Chem B [Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-grained model incorporating water’s effects on the system’s free energy. Following previous studies, we modeled an unstructured protein as a polymer chain. Because we are interested in investigating how it responds to thermodynamic changes near a hydrophobic surface under different conditions, we chose an entirely hydrophobic sequence to maximize the interaction with the interface. We show that a slit pore confinement without top-down symmetry enhances the unfolding and adsorption of the chain in both random coil and globular states. Moreover, we demonstrate that the hydration water modulates this behavior depending on the thermodynamic parameters. Our findings provide insights into how homopolymers and possibly unstructured proteins can sense and adjust to external stimuli such as nanointerfaces or stresses. American Chemical Society 2023-06-19 /pmc/articles/PMC10316403/ /pubmed/37334684 http://dx.doi.org/10.1021/acs.jpcb.3c00937 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Faulí, Bernat Durà Bianco, Valentino Franzese, Giancarlo Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions |
title | Hydrophobic Homopolymer’s
Coil–Globule Transition and Adsorption onto a Hydrophobic Surface
under Different Conditions |
title_full | Hydrophobic Homopolymer’s
Coil–Globule Transition and Adsorption onto a Hydrophobic Surface
under Different Conditions |
title_fullStr | Hydrophobic Homopolymer’s
Coil–Globule Transition and Adsorption onto a Hydrophobic Surface
under Different Conditions |
title_full_unstemmed | Hydrophobic Homopolymer’s
Coil–Globule Transition and Adsorption onto a Hydrophobic Surface
under Different Conditions |
title_short | Hydrophobic Homopolymer’s
Coil–Globule Transition and Adsorption onto a Hydrophobic Surface
under Different Conditions |
title_sort | hydrophobic homopolymer’s
coil–globule transition and adsorption onto a hydrophobic surface
under different conditions |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10316403/ https://www.ncbi.nlm.nih.gov/pubmed/37334684 http://dx.doi.org/10.1021/acs.jpcb.3c00937 |
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