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Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions

[Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-g...

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Autores principales: Faulí, Bernat Durà, Bianco, Valentino, Franzese, Giancarlo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10316403/
https://www.ncbi.nlm.nih.gov/pubmed/37334684
http://dx.doi.org/10.1021/acs.jpcb.3c00937
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author Faulí, Bernat Durà
Bianco, Valentino
Franzese, Giancarlo
author_facet Faulí, Bernat Durà
Bianco, Valentino
Franzese, Giancarlo
author_sort Faulí, Bernat Durà
collection PubMed
description [Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-grained model incorporating water’s effects on the system’s free energy. Following previous studies, we modeled an unstructured protein as a polymer chain. Because we are interested in investigating how it responds to thermodynamic changes near a hydrophobic surface under different conditions, we chose an entirely hydrophobic sequence to maximize the interaction with the interface. We show that a slit pore confinement without top-down symmetry enhances the unfolding and adsorption of the chain in both random coil and globular states. Moreover, we demonstrate that the hydration water modulates this behavior depending on the thermodynamic parameters. Our findings provide insights into how homopolymers and possibly unstructured proteins can sense and adjust to external stimuli such as nanointerfaces or stresses.
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spelling pubmed-103164032023-07-04 Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions Faulí, Bernat Durà Bianco, Valentino Franzese, Giancarlo J Phys Chem B [Image: see text] Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil–globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we use Monte Carlo calculations of a coarse-grained model incorporating water’s effects on the system’s free energy. Following previous studies, we modeled an unstructured protein as a polymer chain. Because we are interested in investigating how it responds to thermodynamic changes near a hydrophobic surface under different conditions, we chose an entirely hydrophobic sequence to maximize the interaction with the interface. We show that a slit pore confinement without top-down symmetry enhances the unfolding and adsorption of the chain in both random coil and globular states. Moreover, we demonstrate that the hydration water modulates this behavior depending on the thermodynamic parameters. Our findings provide insights into how homopolymers and possibly unstructured proteins can sense and adjust to external stimuli such as nanointerfaces or stresses. American Chemical Society 2023-06-19 /pmc/articles/PMC10316403/ /pubmed/37334684 http://dx.doi.org/10.1021/acs.jpcb.3c00937 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Faulí, Bernat Durà
Bianco, Valentino
Franzese, Giancarlo
Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title_full Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title_fullStr Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title_full_unstemmed Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title_short Hydrophobic Homopolymer’s Coil–Globule Transition and Adsorption onto a Hydrophobic Surface under Different Conditions
title_sort hydrophobic homopolymer’s coil–globule transition and adsorption onto a hydrophobic surface under different conditions
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10316403/
https://www.ncbi.nlm.nih.gov/pubmed/37334684
http://dx.doi.org/10.1021/acs.jpcb.3c00937
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