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A biological camera that captures and stores images directly into DNA
The increasing integration between biological and digital interfaces has led to heightened interest in utilizing biological materials to store digital data, with the most promising one involving the storage of data within defined sequences of DNA that are created by de novo DNA synthesis. However, t...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318082/ https://www.ncbi.nlm.nih.gov/pubmed/37400476 http://dx.doi.org/10.1038/s41467-023-38876-w |
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author | Lim, Cheng Kai Yeoh, Jing Wui Kunartama, Aurelius Andrew Yew, Wen Shan Poh, Chueh Loo |
author_facet | Lim, Cheng Kai Yeoh, Jing Wui Kunartama, Aurelius Andrew Yew, Wen Shan Poh, Chueh Loo |
author_sort | Lim, Cheng Kai |
collection | PubMed |
description | The increasing integration between biological and digital interfaces has led to heightened interest in utilizing biological materials to store digital data, with the most promising one involving the storage of data within defined sequences of DNA that are created by de novo DNA synthesis. However, there is a lack of methods that can obviate the need for de novo DNA synthesis, which tends to be costly and inefficient. Here, in this work, we detail a method of capturing 2-dimensional light patterns into DNA, by utilizing optogenetic circuits to record light exposure into DNA, encoding spatial locations with barcoding, and retrieving stored images via high-throughput next-generation sequencing. We demonstrate the encoding of multiple images into DNA, totaling 1152 bits, selective image retrieval, as well as robustness to drying, heat and UV. We also demonstrate successful multiplexing using multiple wavelengths of light, capturing 2 different images simultaneously using red and blue light. This work thus establishes a ‘living digital camera’, paving the way towards integrating biological systems with digital devices. |
format | Online Article Text |
id | pubmed-10318082 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-103180822023-07-05 A biological camera that captures and stores images directly into DNA Lim, Cheng Kai Yeoh, Jing Wui Kunartama, Aurelius Andrew Yew, Wen Shan Poh, Chueh Loo Nat Commun Article The increasing integration between biological and digital interfaces has led to heightened interest in utilizing biological materials to store digital data, with the most promising one involving the storage of data within defined sequences of DNA that are created by de novo DNA synthesis. However, there is a lack of methods that can obviate the need for de novo DNA synthesis, which tends to be costly and inefficient. Here, in this work, we detail a method of capturing 2-dimensional light patterns into DNA, by utilizing optogenetic circuits to record light exposure into DNA, encoding spatial locations with barcoding, and retrieving stored images via high-throughput next-generation sequencing. We demonstrate the encoding of multiple images into DNA, totaling 1152 bits, selective image retrieval, as well as robustness to drying, heat and UV. We also demonstrate successful multiplexing using multiple wavelengths of light, capturing 2 different images simultaneously using red and blue light. This work thus establishes a ‘living digital camera’, paving the way towards integrating biological systems with digital devices. Nature Publishing Group UK 2023-07-03 /pmc/articles/PMC10318082/ /pubmed/37400476 http://dx.doi.org/10.1038/s41467-023-38876-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lim, Cheng Kai Yeoh, Jing Wui Kunartama, Aurelius Andrew Yew, Wen Shan Poh, Chueh Loo A biological camera that captures and stores images directly into DNA |
title | A biological camera that captures and stores images directly into DNA |
title_full | A biological camera that captures and stores images directly into DNA |
title_fullStr | A biological camera that captures and stores images directly into DNA |
title_full_unstemmed | A biological camera that captures and stores images directly into DNA |
title_short | A biological camera that captures and stores images directly into DNA |
title_sort | biological camera that captures and stores images directly into dna |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318082/ https://www.ncbi.nlm.nih.gov/pubmed/37400476 http://dx.doi.org/10.1038/s41467-023-38876-w |
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