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Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles

The use of enzymes to accelerate chemical reactions for the synthesis of industrially important products is rapidly gaining popularity. Biocatalysis is an environment-friendly approach as it not only uses non-toxic, biodegradable, and renewable raw materials but also helps to reduce waste generation...

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Autores principales: Chatterjee, Anwesha, Puri, Sonakshi, Sharma, Pankaj Kumar, Deepa, P. R., Chowdhury, Shibasish
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318364/
https://www.ncbi.nlm.nih.gov/pubmed/37409164
http://dx.doi.org/10.3389/fbioe.2023.1229300
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author Chatterjee, Anwesha
Puri, Sonakshi
Sharma, Pankaj Kumar
Deepa, P. R.
Chowdhury, Shibasish
author_facet Chatterjee, Anwesha
Puri, Sonakshi
Sharma, Pankaj Kumar
Deepa, P. R.
Chowdhury, Shibasish
author_sort Chatterjee, Anwesha
collection PubMed
description The use of enzymes to accelerate chemical reactions for the synthesis of industrially important products is rapidly gaining popularity. Biocatalysis is an environment-friendly approach as it not only uses non-toxic, biodegradable, and renewable raw materials but also helps to reduce waste generation. In this context, enzymes from organisms living in extreme conditions (extremozymes) have been studied extensively and used in industries (food and pharmaceutical), agriculture, and molecular biology, as they are adapted to catalyze reactions withstanding harsh environmental conditions. Enzyme engineering plays a key role in integrating the structure-function insights from reference enzymes and their utilization for developing improvised catalysts. It helps to transform the enzymes to enhance their activity, stability, substrates-specificity, and substrate-versatility by suitably modifying enzyme structure, thereby creating new variants of the enzyme with improved physical and chemical properties. Here, we have illustrated the relatively less-tapped potentials of plant enzymes in general and their sub-class of extremozymes for industrial applications. Plants are exposed to a wide range of abiotic and biotic stresses due to their sessile nature, for which they have developed various mechanisms, including the production of stress-response enzymes. While extremozymes from microorganisms have been extensively studied, there are clear indications that plants and algae also produce extremophilic enzymes as their survival strategy, which may find industrial applications. Typical plant enzymes, such as ascorbate peroxidase, papain, carbonic anhydrase, glycoside hydrolases and others have been examined in this review with respect to their stress-tolerant features and further improvement via enzyme engineering. Some rare instances of plant-derived enzymes that point to greater exploration for industrial use have also been presented here. The overall implication is to utilize biochemical clues from the plant-based enzymes for robust, efficient, and substrate/reaction conditions-versatile scaffolds or reference leads for enzyme engineering.
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spelling pubmed-103183642023-07-05 Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles Chatterjee, Anwesha Puri, Sonakshi Sharma, Pankaj Kumar Deepa, P. R. Chowdhury, Shibasish Front Bioeng Biotechnol Bioengineering and Biotechnology The use of enzymes to accelerate chemical reactions for the synthesis of industrially important products is rapidly gaining popularity. Biocatalysis is an environment-friendly approach as it not only uses non-toxic, biodegradable, and renewable raw materials but also helps to reduce waste generation. In this context, enzymes from organisms living in extreme conditions (extremozymes) have been studied extensively and used in industries (food and pharmaceutical), agriculture, and molecular biology, as they are adapted to catalyze reactions withstanding harsh environmental conditions. Enzyme engineering plays a key role in integrating the structure-function insights from reference enzymes and their utilization for developing improvised catalysts. It helps to transform the enzymes to enhance their activity, stability, substrates-specificity, and substrate-versatility by suitably modifying enzyme structure, thereby creating new variants of the enzyme with improved physical and chemical properties. Here, we have illustrated the relatively less-tapped potentials of plant enzymes in general and their sub-class of extremozymes for industrial applications. Plants are exposed to a wide range of abiotic and biotic stresses due to their sessile nature, for which they have developed various mechanisms, including the production of stress-response enzymes. While extremozymes from microorganisms have been extensively studied, there are clear indications that plants and algae also produce extremophilic enzymes as their survival strategy, which may find industrial applications. Typical plant enzymes, such as ascorbate peroxidase, papain, carbonic anhydrase, glycoside hydrolases and others have been examined in this review with respect to their stress-tolerant features and further improvement via enzyme engineering. Some rare instances of plant-derived enzymes that point to greater exploration for industrial use have also been presented here. The overall implication is to utilize biochemical clues from the plant-based enzymes for robust, efficient, and substrate/reaction conditions-versatile scaffolds or reference leads for enzyme engineering. Frontiers Media S.A. 2023-06-20 /pmc/articles/PMC10318364/ /pubmed/37409164 http://dx.doi.org/10.3389/fbioe.2023.1229300 Text en Copyright © 2023 Chatterjee, Puri, Sharma, Deepa and Chowdhury. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Chatterjee, Anwesha
Puri, Sonakshi
Sharma, Pankaj Kumar
Deepa, P. R.
Chowdhury, Shibasish
Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title_full Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title_fullStr Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title_full_unstemmed Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title_short Nature-inspired Enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
title_sort nature-inspired enzyme engineering and sustainable catalysis: biochemical clues from the world of plants and extremophiles
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10318364/
https://www.ncbi.nlm.nih.gov/pubmed/37409164
http://dx.doi.org/10.3389/fbioe.2023.1229300
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