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Intrinsically disordered proteins and conformational noise: The hypothesis a decade later

Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcr...

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Detalles Bibliográficos
Autores principales: Kulkarni, Prakash, Salgia, Ravi, Rangarajan, Govindan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319216/
https://www.ncbi.nlm.nih.gov/pubmed/37408690
http://dx.doi.org/10.1016/j.isci.2023.107109
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author Kulkarni, Prakash
Salgia, Ravi
Rangarajan, Govindan
author_facet Kulkarni, Prakash
Salgia, Ravi
Rangarajan, Govindan
author_sort Kulkarni, Prakash
collection PubMed
description Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcriptional noise, can contribute to phenotypic switching by rewiring the cellular protein interaction network. Since most transcription factors are IDPs, we posited that conformational noise is an integral component of transcriptional noise implying that IDPs may amplify total noise in the system either stochastically or in response to environmental changes. Here, we review progress in elucidating the details of the hypothesis. We highlight empirical evidence supporting the hypothesis, discuss conceptual advances that underscore its fundamental importance and implications, and identify areas for future investigations.
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spelling pubmed-103192162023-07-05 Intrinsically disordered proteins and conformational noise: The hypothesis a decade later Kulkarni, Prakash Salgia, Ravi Rangarajan, Govindan iScience Perspective Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcriptional noise, can contribute to phenotypic switching by rewiring the cellular protein interaction network. Since most transcription factors are IDPs, we posited that conformational noise is an integral component of transcriptional noise implying that IDPs may amplify total noise in the system either stochastically or in response to environmental changes. Here, we review progress in elucidating the details of the hypothesis. We highlight empirical evidence supporting the hypothesis, discuss conceptual advances that underscore its fundamental importance and implications, and identify areas for future investigations. Elsevier 2023-06-15 /pmc/articles/PMC10319216/ /pubmed/37408690 http://dx.doi.org/10.1016/j.isci.2023.107109 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Perspective
Kulkarni, Prakash
Salgia, Ravi
Rangarajan, Govindan
Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title_full Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title_fullStr Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title_full_unstemmed Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title_short Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
title_sort intrinsically disordered proteins and conformational noise: the hypothesis a decade later
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319216/
https://www.ncbi.nlm.nih.gov/pubmed/37408690
http://dx.doi.org/10.1016/j.isci.2023.107109
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