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Intrinsically disordered proteins and conformational noise: The hypothesis a decade later
Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcr...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319216/ https://www.ncbi.nlm.nih.gov/pubmed/37408690 http://dx.doi.org/10.1016/j.isci.2023.107109 |
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author | Kulkarni, Prakash Salgia, Ravi Rangarajan, Govindan |
author_facet | Kulkarni, Prakash Salgia, Ravi Rangarajan, Govindan |
author_sort | Kulkarni, Prakash |
collection | PubMed |
description | Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcriptional noise, can contribute to phenotypic switching by rewiring the cellular protein interaction network. Since most transcription factors are IDPs, we posited that conformational noise is an integral component of transcriptional noise implying that IDPs may amplify total noise in the system either stochastically or in response to environmental changes. Here, we review progress in elucidating the details of the hypothesis. We highlight empirical evidence supporting the hypothesis, discuss conceptual advances that underscore its fundamental importance and implications, and identify areas for future investigations. |
format | Online Article Text |
id | pubmed-10319216 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-103192162023-07-05 Intrinsically disordered proteins and conformational noise: The hypothesis a decade later Kulkarni, Prakash Salgia, Ravi Rangarajan, Govindan iScience Perspective Phenotypic plasticity is the ability of individual genotypes to produce different phenotypes in response to environmental perturbations. We previously postulated how conformational noise emanating from conformational dynamics of intrinsically disordered proteins (IDPs) which is distinct from transcriptional noise, can contribute to phenotypic switching by rewiring the cellular protein interaction network. Since most transcription factors are IDPs, we posited that conformational noise is an integral component of transcriptional noise implying that IDPs may amplify total noise in the system either stochastically or in response to environmental changes. Here, we review progress in elucidating the details of the hypothesis. We highlight empirical evidence supporting the hypothesis, discuss conceptual advances that underscore its fundamental importance and implications, and identify areas for future investigations. Elsevier 2023-06-15 /pmc/articles/PMC10319216/ /pubmed/37408690 http://dx.doi.org/10.1016/j.isci.2023.107109 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Perspective Kulkarni, Prakash Salgia, Ravi Rangarajan, Govindan Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title | Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title_full | Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title_fullStr | Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title_full_unstemmed | Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title_short | Intrinsically disordered proteins and conformational noise: The hypothesis a decade later |
title_sort | intrinsically disordered proteins and conformational noise: the hypothesis a decade later |
topic | Perspective |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319216/ https://www.ncbi.nlm.nih.gov/pubmed/37408690 http://dx.doi.org/10.1016/j.isci.2023.107109 |
work_keys_str_mv | AT kulkarniprakash intrinsicallydisorderedproteinsandconformationalnoisethehypothesisadecadelater AT salgiaravi intrinsicallydisorderedproteinsandconformationalnoisethehypothesisadecadelater AT rangarajangovindan intrinsicallydisorderedproteinsandconformationalnoisethehypothesisadecadelater |