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A transformer-based approach for early prediction of soybean yield using time-series images

Crop yield prediction which provides critical information for management decision-making is of significant importance in precision agriculture. Traditional manual inspection and calculation are often laborious and time-consuming. For yield prediction using high-resolution images, existing methods, e...

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Autores principales: Bi, Luning, Wally, Owen, Hu, Guiping, Tenuta, Albert U., Kandel, Yuba R., Mueller, Daren S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319415/
https://www.ncbi.nlm.nih.gov/pubmed/37409295
http://dx.doi.org/10.3389/fpls.2023.1173036
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author Bi, Luning
Wally, Owen
Hu, Guiping
Tenuta, Albert U.
Kandel, Yuba R.
Mueller, Daren S.
author_facet Bi, Luning
Wally, Owen
Hu, Guiping
Tenuta, Albert U.
Kandel, Yuba R.
Mueller, Daren S.
author_sort Bi, Luning
collection PubMed
description Crop yield prediction which provides critical information for management decision-making is of significant importance in precision agriculture. Traditional manual inspection and calculation are often laborious and time-consuming. For yield prediction using high-resolution images, existing methods, e.g., convolutional neural network, are challenging to model long range multi-level dependencies across image regions. This paper proposes a transformer-based approach for yield prediction using early-stage images and seed information. First, each original image is segmented into plant and soil categories. Two vision transformer (ViT) modules are designed to extract features from each category. Then a transformer module is established to deal with the time-series features. Finally, the image features and seed features are combined to estimate the yield. A case study has been conducted using a dataset that was collected during the 2020 soybean-growing seasons in Canadian fields. Compared with other baseline models, the proposed method can reduce the prediction error by more than 40%. The impact of seed information on predictions is studied both between models and within a single model. The results show that the influence of seed information varies among different plots but it is particularly important for the prediction of low yields.
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spelling pubmed-103194152023-07-05 A transformer-based approach for early prediction of soybean yield using time-series images Bi, Luning Wally, Owen Hu, Guiping Tenuta, Albert U. Kandel, Yuba R. Mueller, Daren S. Front Plant Sci Plant Science Crop yield prediction which provides critical information for management decision-making is of significant importance in precision agriculture. Traditional manual inspection and calculation are often laborious and time-consuming. For yield prediction using high-resolution images, existing methods, e.g., convolutional neural network, are challenging to model long range multi-level dependencies across image regions. This paper proposes a transformer-based approach for yield prediction using early-stage images and seed information. First, each original image is segmented into plant and soil categories. Two vision transformer (ViT) modules are designed to extract features from each category. Then a transformer module is established to deal with the time-series features. Finally, the image features and seed features are combined to estimate the yield. A case study has been conducted using a dataset that was collected during the 2020 soybean-growing seasons in Canadian fields. Compared with other baseline models, the proposed method can reduce the prediction error by more than 40%. The impact of seed information on predictions is studied both between models and within a single model. The results show that the influence of seed information varies among different plots but it is particularly important for the prediction of low yields. Frontiers Media S.A. 2023-06-20 /pmc/articles/PMC10319415/ /pubmed/37409295 http://dx.doi.org/10.3389/fpls.2023.1173036 Text en Copyright © 2023 Luning Bi, Guiping Hu, Albert U. Tenuta, Yuba R. Kandel and Daren S. Mueller and His Majesty the King in Right of Canada, as represented by the Minister of Agriculture and Agri-Food Canada for the contribution of OwenWally https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Bi, Luning
Wally, Owen
Hu, Guiping
Tenuta, Albert U.
Kandel, Yuba R.
Mueller, Daren S.
A transformer-based approach for early prediction of soybean yield using time-series images
title A transformer-based approach for early prediction of soybean yield using time-series images
title_full A transformer-based approach for early prediction of soybean yield using time-series images
title_fullStr A transformer-based approach for early prediction of soybean yield using time-series images
title_full_unstemmed A transformer-based approach for early prediction of soybean yield using time-series images
title_short A transformer-based approach for early prediction of soybean yield using time-series images
title_sort transformer-based approach for early prediction of soybean yield using time-series images
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319415/
https://www.ncbi.nlm.nih.gov/pubmed/37409295
http://dx.doi.org/10.3389/fpls.2023.1173036
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