Cargando…

Watson‐Crick Base Pairing of N‐Methoxy‐1,3‐Oxazinane (MOANA) Nucleoside Analogues within Double‐Helical DNA

Hairpin oligodeoxynucleotides incorporating a (2R,3S)‐4‐(methoxyamino)butane‐1,2,3‐triol residue in the middle of the double‐helical stem and opposite to either one of the canonical nucleobases or an abasic 2‐(hydroxymethyl)tetrahydrofuran‐3‐ol spacer were synthesized. Under mildly acidic conditions...

Descripción completa

Detalles Bibliográficos
Autores principales:	Afari, Mark N. K., Nurmi, Kasper, Virta, Pasi, Lönnberg, Tuomas
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	John Wiley and Sons Inc. 2023
Materias:	Research Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10319751/ https://www.ncbi.nlm.nih.gov/pubmed/37403132 http://dx.doi.org/10.1002/open.202300085

Ejemplares similares

An innate twist between Crick’s wobble and Watson-Crick base pairs
por: Ananth, Prakash, et al.
Publicado: (2013)

Accurate geometrical restraints for Watson–Crick base pairs
por: Gilski, Miroslaw, et al.
Publicado: (2019)

Selective prebiotic conversion of pyrimidine and purine anhydronucleosides into Watson-Crick base-pairing arabino-furanosyl nucleosides in water
por: Roberts, Samuel J., et al.
Publicado: (2018)

Non-dissociative structural transitions of the Watson-Crick and reverse Watson-Crick А·Т DNA base pairs into the Hoogsteen and reverse Hoogsteen forms
por: Brovarets’, Ol’ha O., et al.
Publicado: (2018)

Crick, Watson y el ADN
por: Strathern, Paul, 1940-
Publicado: (1999)

The multiple personalities of Watson and Crick strands
por: Cartwright, Reed A, et al.
Publicado: (2011)

A rule of seven in Watson-Crick base pairing of mismatched sequences
por: Cisse, Ibrahim I., et al.
Publicado: (2012)

Watson–Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation
por: Rypniewski, Wojciech, et al.
Publicado: (2016)

Crystallographic evidence of Watson–Crick connectivity in the base pair of anionic adenine with thymine
por: Mishra, Manish Kumar, et al.
Publicado: (2020)

Recognition of Watson-Crick base pairs: constraints and limits due to geometric selection and tautomerism
por: Westhof, Eric, et al.
Publicado: (2014)

Alchemical Free-Energy Calculations of Watson–Crick and Hoogsteen Base Pairing Interconversion in DNA
por: Geronimo, Inacrist, et al.
Publicado: (2022)

KlenTaq polymerase replicates unnatural base pairs by inducing a Watson-Crick geometry
por: Betz, Karin, et al.
Publicado: (2012)

Comparable Stability of Hoogsteen and Watson–Crick Base Pairs in Ionic Liquid Choline Dihydrogen Phosphate
por: Tateishi-Karimata, Hisae, et al.
Publicado: (2014)

Non-Watson–Crick RNA synthesis suited to origin functions
por: Puthenvedu, Deepa, et al.
Publicado: (2018)

Comprehensive thermodynamic analysis of 3′ double-nucleotide overhangs neighboring Watson–Crick terminal base pairs
por: O'Toole, Amanda S., et al.
Publicado: (2006)

Characterization of the Trans Watson-Crick GU Base Pair Located in the Catalytic Core of the Antigenomic HDV Ribozyme
por: Lévesque, Dominique, et al.
Publicado: (2012)

Silver (I) as DNA glue: Ag(+)-mediated guanine pairing revealed by removing Watson-Crick constraints
por: Swasey, Steven M., et al.
Publicado: (2015)

Watson-Crick Base-Pairing Requirements for ssDNA Recognition and Processing in Replication-Initiating HUH Endonucleases
por: Smiley, Adam T., et al.
Publicado: (2022)

5‐Oxyacetic Acid Modification Destabilizes Double Helical Stem Structures and Favors Anionic Watson–Crick like cmo(5)U‐G Base Pairs
por: Strebitzer, Elisabeth, et al.
Publicado: (2018)

Effect of loop length variation on quadruplex-Watson Crick duplex competition
por: Kumar, Niti, et al.
Publicado: (2008)

Atomistic insight into the kinetic pathways for Watson–Crick to Hoogsteen transitions in DNA
por: Vreede, Jocelyne, et al.
Publicado: (2019)

Higher order structural effects stabilizing the reverse Watson–Crick Guanine-Cytosine base pair in functional RNAs
por: Chawla, Mohit, et al.
Publicado: (2014)

Free energy landscape and transition pathways from Watson–Crick to Hoogsteen base pairing in free duplex DNA
por: Yang, Changwon, et al.
Publicado: (2015)

Differential Stabilities and Sequence-Dependent Base Pair Opening Dynamics of Watson–Crick Base Pairs with 5-Hydroxymethylcytosine, 5-Formylcytosine, or 5-Carboxylcytosine
por: Szulik, Marta W., et al.
Publicado: (2015)

Probing Watson-Crick and Hoogsteen base pairing in duplex DNA using dynamic nuclear polarization solid-state NMR spectroscopy
por: Conroy, Daniel W., et al.
Publicado: (2022)

Backbone-free duplex-stacked monomer nucleic acids exhibiting Watson–Crick selectivity
por: Smith, Gregory P., et al.
Publicado: (2018)

Multiscale Modeling of Wobble to Watson–Crick-Like Guanine–Uracil Tautomerization Pathways in RNA
por: Chandorkar, Shreya, et al.
Publicado: (2021)

Correction to Differential Stabilities and Sequence-Dependent Base Pair Opening Dynamics of Watson–Crick Base Pairs with 5-Hydroxymethylcytosine, 5-Formylcytosine, or 5-Carboxylcytosine
por: Szulik, Marta W., et al.
Publicado: (2015)

Thermodynamic stability and Watson–Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect
por: Ui-Tei, Kumiko, et al.
Publicado: (2008)

Silver(I) Coordination in Silver(I)‐Mediated Homo Base Pairs of 6‐Pyrazolylpurine in DNA Duplexes Involves the Watson–Crick Edge
por: Escher, Daniela, et al.
Publicado: (2020)

A natural non-Watson–Crick base pair in human mitochondrial tRNA(Thr) causes structural and functional susceptibility to local mutations
por: Wang, Yong, et al.
Publicado: (2018)

Correction to ‘Thermodynamic stability and Watson–Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect’
Publicado: (2023)

2-Trifluoromethyl-6-mercurianiline Nucleotide, a Sensitive (19)F NMR Probe for Hg(II)-mediated Base Pairing
por: Aro-Heinilä, Asmo, et al.
Publicado: (2021)

Validation of the nearest-neighbor model for Watson–Crick self-complementary DNA duplexes in molecular crowding condition
por: Ghosh, Saptarshi, et al.
Publicado: (2019)

Context-sensitivity of isosteric substitutions of non-Watson–Crick basepairs in recurrent RNA 3D motifs
por: Khisamutdinov, Emil F, et al.
Publicado: (2021)

Formation of Mixed-Ligand Complexes of Pd(2+) with Nucleoside 5'-Monophosphates and Some Metal-Ion-Binding Nucleoside Surrogates
por: Golubev, Oleg, et al.
Publicado: (2014)

Molecular crowding induces primer extension by RNA polymerase through base stacking beyond Watson–Crick rules
por: Takahashi, Shuntaro, et al.
Publicado: (2020)

Nucleic acids through condensation of nucleosides and phosphorous acid in the presence of sulfur
por: Lönnberg, Tuomas
Publicado: (2016)

Nearest neighbor parameters for Watson–Crick complementary heteroduplexes formed between 2′-O-methyl RNA and RNA oligonucleotides
por: Kierzek, Elzbieta, et al.
Publicado: (2006)

5‐Aza‐7‐deazaguanine–Isoguanine and Guanine–Isoguanine Base Pairs in Watson–Crick DNA: The Impact of Purine Tracts, Clickable Dendritic Side Chains, and Pyrene Adducts
por: Zhang, Aigui, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_huc5qb71s6tmocga1nvbi8ojmg