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Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides

Glycans are an important group of natural biopolymers, which not only play the role of a major biological energy resource but also as signaling molecules. As a result, structural characterization or sequencing of glycans, as well as targeted synthesis of glycans, is of great interest for understandi...

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Autores principales: Sun, Yunze, Wu, Yiran, Ma, Dachuan, Li, Jian-Jun, Liu, Xianming, You, Yuanjiang, Lu, Jun, Liu, Zhen, Cheng, Xin, Du, Yuguang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320006/
https://www.ncbi.nlm.nih.gov/pubmed/37415787
http://dx.doi.org/10.3389/fbioe.2023.1201300
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author Sun, Yunze
Wu, Yiran
Ma, Dachuan
Li, Jian-Jun
Liu, Xianming
You, Yuanjiang
Lu, Jun
Liu, Zhen
Cheng, Xin
Du, Yuguang
author_facet Sun, Yunze
Wu, Yiran
Ma, Dachuan
Li, Jian-Jun
Liu, Xianming
You, Yuanjiang
Lu, Jun
Liu, Zhen
Cheng, Xin
Du, Yuguang
author_sort Sun, Yunze
collection PubMed
description Glycans are an important group of natural biopolymers, which not only play the role of a major biological energy resource but also as signaling molecules. As a result, structural characterization or sequencing of glycans, as well as targeted synthesis of glycans, is of great interest for understanding their structure–function relationship. However, this generally involves tedious manual operations and high reagent consumptions, which are the main technical bottlenecks retarding the advances of both automatic glycan sequencing and synthesis. Until now, automated enzymatic glycan sequencers or synthesizers are still not available on the market. In this study, to promote the development of automation in glycan sequencing or synthesis, first, programmed degradation and synthesis of glycans catalyzed by enzymes were successfully conducted on a digital microfluidic (DMF) device by using microdroplets as microreactors. In order to develop automatic glycan synthesizers and sequencers, a strategy integrating enzymatic oligosaccharide degradation or synthesis and magnetic manipulation to realize the separation and purification process after enzymatic reactions was designed and performed on DMF. An automatic process for enzymatic degradation of tetra-N-acetyl chitotetraose was achieved. Furthermore, the two-step enzymatic synthesis of lacto-N-tetraose was successfully and efficiently completed on the DMF platform. This work demonstrated here would open the door to further develop automatic enzymatic glycan synthesizers or sequencers based on DMF.
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spelling pubmed-103200062023-07-06 Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides Sun, Yunze Wu, Yiran Ma, Dachuan Li, Jian-Jun Liu, Xianming You, Yuanjiang Lu, Jun Liu, Zhen Cheng, Xin Du, Yuguang Front Bioeng Biotechnol Bioengineering and Biotechnology Glycans are an important group of natural biopolymers, which not only play the role of a major biological energy resource but also as signaling molecules. As a result, structural characterization or sequencing of glycans, as well as targeted synthesis of glycans, is of great interest for understanding their structure–function relationship. However, this generally involves tedious manual operations and high reagent consumptions, which are the main technical bottlenecks retarding the advances of both automatic glycan sequencing and synthesis. Until now, automated enzymatic glycan sequencers or synthesizers are still not available on the market. In this study, to promote the development of automation in glycan sequencing or synthesis, first, programmed degradation and synthesis of glycans catalyzed by enzymes were successfully conducted on a digital microfluidic (DMF) device by using microdroplets as microreactors. In order to develop automatic glycan synthesizers and sequencers, a strategy integrating enzymatic oligosaccharide degradation or synthesis and magnetic manipulation to realize the separation and purification process after enzymatic reactions was designed and performed on DMF. An automatic process for enzymatic degradation of tetra-N-acetyl chitotetraose was achieved. Furthermore, the two-step enzymatic synthesis of lacto-N-tetraose was successfully and efficiently completed on the DMF platform. This work demonstrated here would open the door to further develop automatic enzymatic glycan synthesizers or sequencers based on DMF. Frontiers Media S.A. 2023-06-21 /pmc/articles/PMC10320006/ /pubmed/37415787 http://dx.doi.org/10.3389/fbioe.2023.1201300 Text en Copyright © 2023 Sun, Wu, Ma, Li, Liu, You, Lu, Liu, Cheng and Du. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Sun, Yunze
Wu, Yiran
Ma, Dachuan
Li, Jian-Jun
Liu, Xianming
You, Yuanjiang
Lu, Jun
Liu, Zhen
Cheng, Xin
Du, Yuguang
Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title_full Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title_fullStr Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title_full_unstemmed Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title_short Digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
title_sort digital microfluidics-engaged automated enzymatic degradation and synthesis of oligosaccharides
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320006/
https://www.ncbi.nlm.nih.gov/pubmed/37415787
http://dx.doi.org/10.3389/fbioe.2023.1201300
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