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The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions

Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to...

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Detalles Bibliográficos
Autores principales: Jiménez-García, Brian, Roel-Touris, Jorge, Barradas-Bautista, Didier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320125/
https://www.ncbi.nlm.nih.gov/pubmed/37140054
http://dx.doi.org/10.1093/nar/gkad327
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author Jiménez-García, Brian
Roel-Touris, Jorge
Barradas-Bautista, Didier
author_facet Jiménez-García, Brian
Roel-Touris, Jorge
Barradas-Bautista, Didier
author_sort Jiménez-García, Brian
collection PubMed
description Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to promote ease of use and to improve user experience. With this goal in mind, we have developed the LightDock Server, a web server for the integrative modeling of macromolecular interactions, along with several dedicated usage modes. The server builds upon the LightDock macromolecular docking framework, which has proved useful for modeling medium-to-high flexible complexes, antibody-antigen interactions, or membrane-associated protein assemblies. We believe that this free-to-use resource will be a valuable addition to the structural biology community and can be accessed online at: https://server.lightdock.org/
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spelling pubmed-103201252023-07-06 The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions Jiménez-García, Brian Roel-Touris, Jorge Barradas-Bautista, Didier Nucleic Acids Res Web Server Issue Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to promote ease of use and to improve user experience. With this goal in mind, we have developed the LightDock Server, a web server for the integrative modeling of macromolecular interactions, along with several dedicated usage modes. The server builds upon the LightDock macromolecular docking framework, which has proved useful for modeling medium-to-high flexible complexes, antibody-antigen interactions, or membrane-associated protein assemblies. We believe that this free-to-use resource will be a valuable addition to the structural biology community and can be accessed online at: https://server.lightdock.org/ Oxford University Press 2023-05-04 /pmc/articles/PMC10320125/ /pubmed/37140054 http://dx.doi.org/10.1093/nar/gkad327 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Web Server Issue
Jiménez-García, Brian
Roel-Touris, Jorge
Barradas-Bautista, Didier
The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title_full The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title_fullStr The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title_full_unstemmed The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title_short The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
title_sort lightdock server: artificial intelligence-powered modeling of macromolecular interactions
topic Web Server Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320125/
https://www.ncbi.nlm.nih.gov/pubmed/37140054
http://dx.doi.org/10.1093/nar/gkad327
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