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The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320125/ https://www.ncbi.nlm.nih.gov/pubmed/37140054 http://dx.doi.org/10.1093/nar/gkad327 |
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author | Jiménez-García, Brian Roel-Touris, Jorge Barradas-Bautista, Didier |
author_facet | Jiménez-García, Brian Roel-Touris, Jorge Barradas-Bautista, Didier |
author_sort | Jiménez-García, Brian |
collection | PubMed |
description | Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to promote ease of use and to improve user experience. With this goal in mind, we have developed the LightDock Server, a web server for the integrative modeling of macromolecular interactions, along with several dedicated usage modes. The server builds upon the LightDock macromolecular docking framework, which has proved useful for modeling medium-to-high flexible complexes, antibody-antigen interactions, or membrane-associated protein assemblies. We believe that this free-to-use resource will be a valuable addition to the structural biology community and can be accessed online at: https://server.lightdock.org/ |
format | Online Article Text |
id | pubmed-10320125 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-103201252023-07-06 The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions Jiménez-García, Brian Roel-Touris, Jorge Barradas-Bautista, Didier Nucleic Acids Res Web Server Issue Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitousness and accessibility are fundamental features to promote ease of use and to improve user experience. With this goal in mind, we have developed the LightDock Server, a web server for the integrative modeling of macromolecular interactions, along with several dedicated usage modes. The server builds upon the LightDock macromolecular docking framework, which has proved useful for modeling medium-to-high flexible complexes, antibody-antigen interactions, or membrane-associated protein assemblies. We believe that this free-to-use resource will be a valuable addition to the structural biology community and can be accessed online at: https://server.lightdock.org/ Oxford University Press 2023-05-04 /pmc/articles/PMC10320125/ /pubmed/37140054 http://dx.doi.org/10.1093/nar/gkad327 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Web Server Issue Jiménez-García, Brian Roel-Touris, Jorge Barradas-Bautista, Didier The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title | The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title_full | The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title_fullStr | The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title_full_unstemmed | The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title_short | The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions |
title_sort | lightdock server: artificial intelligence-powered modeling of macromolecular interactions |
topic | Web Server Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320125/ https://www.ncbi.nlm.nih.gov/pubmed/37140054 http://dx.doi.org/10.1093/nar/gkad327 |
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